Table 2.
Annotation of aberrant genes relevant to sunitinib sensitivity
CNV | |||
---|---|---|---|
HGNC |
Alteration |
CN |
|
RET |
H.AMP |
4.4 |
|
KRAS |
H.AMP |
4.2 |
|
EGFR |
H.AMP |
4.7 |
|
PTEN |
H.DEL |
0.9 |
|
SNV | |||
HGNC |
Alteration |
Consequence |
Quality |
AKT1 | c. G529A p. A117T | Likely benign | Low |
Next generation sequencing of unusual responder patient with testicular cancer indicated tumor harboring multiple copy number aberrations. Only 5 alterations were found to have reported relevant information in tumors/cells treated with sunitinib: RET amplification, PTEN loss, EGFR and KRAS amplification.
HGNC – Hugo genome nomenclature committee, CNV, copy number variation, SNV- Single nucleotide variants.
NOTE: Genomic alterations detected may or may not have reported altered protein function.