Table 7.
Results for Imputed SNPs in Regions Used in Linkage Analyses in Greenwood et al. (2013)
| Position | SNP | Chr | Allele1 | Allele2 | R2 | Beta | SE | Test | p value |
|---|---|---|---|---|---|---|---|---|---|
| 61346176 | rs73104810 | 3 | G | A | 0.73 | .075 | .019 | 3.977 | 7.08E-05 |
| 63525288 | rs17069000 | 3 | C | A | 0.45 | −.125 | .028 | −4.532 | 6.00E-06 |
| 63657227 | rs144806580 | 3 | C | T | 0.78 | −.088 | .023 | −3.913 | 9.25E-05 |
| 64359281 | rs76018258 | 3 | C | T | 0.94 | −.142 | .034 | −4.173 | 3.07E-05 |
| 64407690 | rs78803532 | 3 | A | G | 0.96 | −.142 | .032 | −4.506 | 6.77E-06 |
| 65246133 | rs187682812 | 3 | T | C | 0.51 | −.350 | .085 | −4.098 | 4.24E-05 |
Note. Chr = chromosome on which each given SNP is located; SNP = single nucleotide polymorphism; Position = base pair location in build GRCh37(hg19); Beta = regression coefficient; SE = standard error; p values = p values for SNP being tested; Allele1 and Allele2 = major and minor alleles, respectively; R2 = imputation R2, a measure of imputation accuracy in our dataset.