Table 4. A comparison of percent of alleles generated in total collection vs core set.

	Arunachal Pradesh		Assam		Manipur		Meghalaya		Mizoram		Nagaland		Tripura
Alleles	Total collection (663 acc.)	Core set (60 acc.)	Total collection (2635 acc.)	Core set (259 acc.)	Total collection (549 acc.)	Core set (60 acc.)	Total collection (2427 acc.)	Core set (242 acc.)	Total collection (107 acc.)	Core set (14 acc.)	Total collection (377 acc.)	Core set (35 acc.)	Total collection (226 acc.)	Core set (31 acc.)
AA	20.08	21.36	19.43	20.63	17.73	18.02	20.66	20.93	18.27	19.07	21.23	20.98	19.33	20.31
CC	21.16	17.68	18.23	18.44	13.51	15.91	16.98	17.22	15.82	16.92	16.83	17.44	18.43	16.96
GG	16.72	18.44	21.10	18.93	24.67	21.07	20.07	18.90	19.55	19.07	20.53	19.86	22.19	20.01
TT	37.83	32.12	34.94	30.20	38.62	34.43	35.17	30.64	36.55	31.70	37.11	31.33	35.32	33.82
CT/TC	1.57	3.70	2.31	3.87	2.14	3.71	2.67	4.45	3.66	4.29	1.59	3.78	2.21	3.81
GA/AG	1.53	3.65	2.32	4.36	2.00	3.94	2.42	4.25	3.76	5.48	1.49	3.17	1.46	3.05
TA/AT	0.33	0.78	0.46	0.96	0.49	0.86	0.56	1.08	0.83	1.31	0.26	0.75	0.37	0.61
GT/TG	0.70	2.00	1.07	2.20	0.80	1.83	1.29	2.10	1.46	1.91	0.87	2.24	0.67	1.22
CA/AC	0.07	0.27	0.14	0.41	0.04	0.22	0.17	0.43	0.10	0.24	0.09	0.47	0.03	0.20