Table 1.

Genome-wide significant association signals of rice blast resistance using the EMMAX algorithm

Strain	Chromosome	Position	Allele	MAF a	P -value	Known loci
CH102	1	5686415	T, A	0.068	6.14E-09
CH102	8	3774060	C, T	0.063	4.36E-10
CH102	9	10663921	G, A	0.053	1.65E-09
CH102	11	21585376	G, A	0.057	2.97E-09
CH149	2	24129162	C, T	0.060	1.04E-09
CH149	4	1193240	C, T	0.120	1.51E-09
CH149	4	24398518	A, C	0.065	5.06E-09
CH149	9	12562701	C, T	0.078	1.30E-10
CH149	11	30618466	G, A	0.102	9.94E-09	Pif [29]
CH149	12	13690289	C, A	0.060	7.53E-15
CH171	4	3571241	G, A	0.068	6.28E-11
CH171	5	22378428	A, T	0.063	3.27E-10
CH171	6	22777049	C, T	0.057	2.05E-09
CH171	7	1181446	A, G	0.052	2.95E-11
CH171	11	16829017	A, G	0.122	8.00E-09
CH171	11	25107794	T, A	0.065	3.09E-10
CH171	12	18051954	C, T	0.058	2.46E-09
CH171	12	23040661	G, A	0.089	2.33E-09
CH172	12	10833734	C, A	0.469	5.33E-10
CH172	12	12959480	G, A	0.467	1.98E-09
CH182	3	1170958	A, G	0.060	7.92E-09
CH182	7	19794146	T, A	0.070	1.16E-09
CH182	8	5587272	C, T	0.055	3.77E-09
CH182	8	25225491	C, T	0.055	3.87E-09
CH182	11	27068156	C, T	0.300	5.36E-09	Pik [28]
CH182	11	30606558	C, T	0.060	2.94E-11	Pif [29]
CH182	12	17934412	A, G	0.076	2.85E-09
CH186	12	13032951	G, A	0.433	4.25E-13
CH212	7	1616159	C, T	0.172	2.40E-09
CH362	11	6526998	G, A	0.240	1.72E-17	Pia [27]

^aMAF: minor allele frequency.