Table 1.
Sequence input for capture design
| Probe seta | No. of sequences | Length (bp) | Predicted coverage (%)b | Source |
|---|---|---|---|---|
| Cufflinks predictions | 155 863 | 56 418 032 | 98.5 | The International Barley Genome Sequencing Consortium (2012) |
| Full-length cDNA | 35 297 | 14 707 427 | 97.0 | Matsumoto et al. (2011) |
| RNA-Seq contigs | 108 759 | 30 663 579 | 97.9 | This study |
| Total | 300 919 | 101 789 038 | 97.8 |
a
Number of sequence contigs after filtering for repetitive sequences.
b
Predicted sequence capture coverage extending capture targets by 100 bp on each side.