Table 5.
Scaffolding linear topological contigs (ltc) using fingerprinted contigs (fpc) assembled at a cut-off of 1e−50, for which the same set of bacterial artificial chromosomes (BACs) was employed
| Chromosome arm | 6AL | 6AS |
| No. of potential scaffolds | 45 | 25 |
| Scaffolding was structurally alloweda | 17 | 10 |
| Structurally allowed scaffolds for which genetic markers were availableb | 6 | 4 |
| Structurally allowed scaffolds were supported by genetic markers | 3 | 3 |
| Structurally allowed scaffolds were not supported by genetic markers | 3 | 1 |
a
The corresponding fpc contig was only composed of BACs from the end of two different ltc contigs, and not from the end of one ltc and the middle of another (not allowed).
b
The corresponding ltc contigs were provided by genetic anchoring information.