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. Author manuscript; available in PMC: 2014 Nov 24.
Published in final edited form as: Ophthalmology. 2007 Dec 27;115(7):1209–1215.e7. doi: 10.1016/j.ophtha.2007.10.032

Table 3.

Primers Used

Gene Region Forward Primer* Reverse Primer*
PLEKHA1 Exon 12 CTGACCGTGTCTGACTGCC CCCCTTATCATCTTTGGCTA
Putative LOC387715/ARMS2 Exon 1 TTGTGTGACGGGAAAAGACA AAGCACCTGAAGGCTGGTTA
Putative LOC387715/ARMS2 Exon 2 TTGTTACAAAAGGAATGGAATGTC GGAATGCAGTGACAGAGAGGA
HTRA1 Promoter a ATGCCACCCACAACAACTTT GGTTCTCTCGCTGAGATTCG
HTRA1 Promoter b CGGATGCACCAAAGATTCTCC TTCGCGTCCTTCAAACTAATGG
HTRA1 Exon 1a GAGGCCCTCCTGCACTCT CAGGTTGGCGTAGGTGTTG
HTRA1 Exon 1b GAGTCGCCATGCAGATCC CGAGCTGGGATGGAGAGA
HTRA1 Exon 2 AAACAAACTTGGGCCATCAG TTGCTAGTGGCGGTGAAAG
HTRA1 Exon 3 TAGGTGTGTGTGGCTGTTGC AAGTTTTCCTGAGCCCCTTC
HTRA1 Exon 4 CGCAGCAAAGGGATGTTAGT GAATCCACATGGCTTGGTCT
HTRA1 Exon 5 CCAGGCAGGGACATAGATTG TCAGCAGCCCAGGAGATTTA
HTRA1 Exon 6 GGTGTCCTGATGCCTCTCTC TGCCATGATCAGAGGACAAA
HTRA1 Exon 7 GTCCAGACCAGGATTTGAGC CCAAGGCTAATGACCTGTCC
HTRA1 Exon 8 AGGAGAAGACGGGAACTGGT CTCGTGGAGCAAGGACTTTT
HTRA1 Exon 9/3′-UTR CTGACCCACTGATGGTTTGA CTATTCCAGCAGCCCAGAGT
*

Primers are written in the 5′ to 3′ direction and were chosen to encompass the entire coding region and flanking intronic sequences using the Primer3 program (http://primer3.sourceforge.net).