Table 5.
Genotype and Allele Frequencies
| Affected Siblings (Index Cases)
|
Unaffected Siblings
|
|||
|---|---|---|---|---|
| Frequency (%) | N | Frequency (%) | N | |
| LOC387715/ARMS2 | ||||
| rs10490924 | ||||
| Genotype | ||||
| TT | 33.58 | 45 | 16.42 | 22 |
| TG | 38.06 | 51 | 32.84 | 44 |
| GG | 28.36 | 38 | 50.75 | 68 |
| Total | 134 | 134 | ||
| Allele | ||||
| T | 52.61 | 141 | 32.84 | 88 |
| G | 47.39 | 127 | 67.16 | 180 |
| Total | 268 | 268 | ||
| rs10664316 | ||||
| Genotype | ||||
| -- | 11.19 | 15 | 18.66 | 25 |
| --AT | 31.34 | 42 | 45.52 | 61 |
| AT | 57.46 | 77 | 35.82 | 48 |
| Total | 134 | 134 | ||
| Allele | ||||
| -- | 26.87 | 72 | 41.42 | 111 |
| AT | 73.13 | 196 | 58.58 | 157 |
| Total | 268 | 268 | ||
| HTRA1 | ||||
| rs11200638 | ||||
| Genotype | ||||
| AA | 32.09 | 43 | 15.67 | 21 |
| AG | 40.30 | 54 | 32.09 | 43 |
| GG | 27.61 | 37 | 52.2 | 70 |
| Total | 134 | 134 | ||
| Allele | ||||
| A | 52.24 | 140 | 31.72 | 85 |
| G | 47.76 | 128 | 68.28 | 183 |
| Total | 268 | 268 | ||
| rs2672598 | ||||
| Genotype | ||||
| TT | 11.94 | 16 | 26.12 | 35 |
| TC | 40.30 | 54 | 47.01 | 63 |
| CC | 47.76 | 64 | 26.87 | 36 |
| Total | 134 | 134 | ||
| Allele | ||||
| T | 32.09 | 86 | 49.63 | 133 |
| C | 67.91 | 182 | 50.37 | 135 |
| Total | 268 | 268 | ||
| rs1049331 | ||||
| Genotype | ||||
| TT | 32.84 | 44 | 15.67 | 21 |
| TC | 39.55 | 53 | 32.09 | 43 |
| CC | 27.61 | 37 | 52.24 | 70 |
| Total | 134 | 134 | ||
| Allele | ||||
| T | 52.61 | 141 | 31.72 | 85 |
| C | 47.39 | 127 | 68.2 | 183 |
| Total | 268 | 268 | ||
| rs2293870 | ||||
| Genotype | ||||
| CC | 0.75 | 1 | 2.24 | 3 |
| TT | 31.34 | 42 | 15.67 | 21 |
| CG | 6.72 | 9 | 9.70 | 13 |
| TG | 32.84 | 44 | 28.36 | 38 |
| CT | 8.96 | 12 | 3.73 | 5 |
| GG | 19.41 | 26 | 40.30 | 54 |
| Total | 134 | 134 | ||
| Allele | ||||
| C | 8.58 | 23 | 8.96 | 24 |
| T | 52.23 | 140 | 31.72 | 85 |
| G | 39.18 | 105 | 59.33 | 159 |
| Total | 268 | 268 | ||