Table 5.
Genotype and Allele Frequencies
Affected Siblings (Index Cases)
|
Unaffected Siblings
|
|||
---|---|---|---|---|
Frequency (%) | N | Frequency (%) | N | |
LOC387715/ARMS2 | ||||
rs10490924 | ||||
Genotype | ||||
TT | 33.58 | 45 | 16.42 | 22 |
TG | 38.06 | 51 | 32.84 | 44 |
GG | 28.36 | 38 | 50.75 | 68 |
Total | 134 | 134 | ||
Allele | ||||
T | 52.61 | 141 | 32.84 | 88 |
G | 47.39 | 127 | 67.16 | 180 |
Total | 268 | 268 | ||
rs10664316 | ||||
Genotype | ||||
-- | 11.19 | 15 | 18.66 | 25 |
--AT | 31.34 | 42 | 45.52 | 61 |
AT | 57.46 | 77 | 35.82 | 48 |
Total | 134 | 134 | ||
Allele | ||||
-- | 26.87 | 72 | 41.42 | 111 |
AT | 73.13 | 196 | 58.58 | 157 |
Total | 268 | 268 | ||
HTRA1 | ||||
rs11200638 | ||||
Genotype | ||||
AA | 32.09 | 43 | 15.67 | 21 |
AG | 40.30 | 54 | 32.09 | 43 |
GG | 27.61 | 37 | 52.2 | 70 |
Total | 134 | 134 | ||
Allele | ||||
A | 52.24 | 140 | 31.72 | 85 |
G | 47.76 | 128 | 68.28 | 183 |
Total | 268 | 268 | ||
rs2672598 | ||||
Genotype | ||||
TT | 11.94 | 16 | 26.12 | 35 |
TC | 40.30 | 54 | 47.01 | 63 |
CC | 47.76 | 64 | 26.87 | 36 |
Total | 134 | 134 | ||
Allele | ||||
T | 32.09 | 86 | 49.63 | 133 |
C | 67.91 | 182 | 50.37 | 135 |
Total | 268 | 268 | ||
rs1049331 | ||||
Genotype | ||||
TT | 32.84 | 44 | 15.67 | 21 |
TC | 39.55 | 53 | 32.09 | 43 |
CC | 27.61 | 37 | 52.24 | 70 |
Total | 134 | 134 | ||
Allele | ||||
T | 52.61 | 141 | 31.72 | 85 |
C | 47.39 | 127 | 68.2 | 183 |
Total | 268 | 268 | ||
rs2293870 | ||||
Genotype | ||||
CC | 0.75 | 1 | 2.24 | 3 |
TT | 31.34 | 42 | 15.67 | 21 |
CG | 6.72 | 9 | 9.70 | 13 |
TG | 32.84 | 44 | 28.36 | 38 |
CT | 8.96 | 12 | 3.73 | 5 |
GG | 19.41 | 26 | 40.30 | 54 |
Total | 134 | 134 | ||
Allele | ||||
C | 8.58 | 23 | 8.96 | 24 |
T | 52.23 | 140 | 31.72 | 85 |
G | 39.18 | 105 | 59.33 | 159 |
Total | 268 | 268 |