. 2014 Nov 24;9(11):e113211. doi: 10.1371/journal.pone.0113211

Table 3. Evaluation of the expression profile variation between RNA-Seq and qRT-PCR for selected genes.

Gene	Gene ID	Description	Fold change (laying_period/ceased_period)		P value
			RNA-Seq	qRT-PCR	RNA-Seq	qRT-PCR
PGR	gi\|45383981\|	progesterone receptor [Gallus gallus]	1.43	11.04	6.05E-11	3.0000E-02
INSR	gi\|513227719\|	PREDICTED: insulin receptor isoform 1 [Gallus gallus]	1.70	7.69	4.73E-17	1.4540E-01
NPY1R	gi\|71895854\|	neuropeptide Y receptor type 1 [Gallus gallus]	1.24	1.27	6.90E-08	3.60E-02
ESRRB	gi\|513188405\|	PREDICTED: steroid hormone receptor ERR2 [Gallus gallus]	1.03	1.21	0.000128778	6.4259E-01
MEL1C	gi\|45382488\|	melatonin receptor type 1C [Gallus gallus]	1.74	1.86	4.76E-05	3.00E-03
VIPR2	gi\|62461589\|	vasoactive intestinal polypeptide receptor 2 precursor [Gallus gallus]	1.09	2.69	5.30E-09	0
LHCGR	gi\|45384387\|	lutropin-choriogonadotropic hormone receptor precursor [Gallus gallus]	−2.36	0.14	1.15E-29	0
SCG2	gi\|513199280\|	PREDICTED: secretogranin-2 [Gallus gallus]	−2.26	0.05	6.99E-38	0
GHR	gi\|47604939\|	growth hormone receptor precursor [Gallus gallus]	−1.51	0.46	2.39E-10	0
STAR	gi\|402692505\|	steroidogenic acute regulatory protein, mitochondrial precursor [Gallus gallus]	−3.11	0.36	1.46E-92	4.9000E-02
HSD3B2	gi\|45384115\|	3 beta-hydroxysteroid dehydrogenase 1 [Gallus gallus]	−5.26	0.03	0	0
CYP11A1	gi\|48976108\|	cholesterol side-chain cleavage enzyme, mitochondrial [Gallus gallus]	−3.36	0.14	1.99E-229	0