Table 1. Sensitivity of SIBA extension to point mutations.
No. of point mutations | ||||
1 | 2 | 3 | 4 | |
Location of point mutation(s) within the amplification template | Δdt (Minutes) | |||
Homologous to the IO DNA region | SB-DNA1 | SB-DNA2 | SB-DNA3 | SB-DNA4 |
7.4 | 24.0 | ND | ND | |
Homologous to the IO 2′-O-methyl RNA region | SB-MET1 | SB-MET2 | SB-MET3 | SB-MET4 |
11.7 | ND | ND | ND |
The SIBA reaction was performed with either a fully homologous target template (SB-template) or with templates containing 1–4 base point mutation(s). The results are expressed as the delay in the threshold detection time (dt), i.e., the average Δdt = average dt of a template containing point mutation(s) minus the average dt of the fully homologous target template (SB-template). ND denotes no detectable amplification of a template. SB-F21 and SB-R21 were the upstream and downstream primers, respectively. The invasion oligonucleotide (IO) used was SB-IO.