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. 2014 Nov 24;9(11):e112656. doi: 10.1371/journal.pone.0112656

Table 1. Sensitivity of SIBA extension to point mutations.

No. of point mutations
1 2 3 4
Location of point mutation(s) within the amplification template Δdt (Minutes)
Homologous to the IO DNA region SB-DNA1 SB-DNA2 SB-DNA3 SB-DNA4
7.4 24.0 ND ND
Homologous to the IO 2′-O-methyl RNA region SB-MET1 SB-MET2 SB-MET3 SB-MET4
11.7 ND ND ND

The SIBA reaction was performed with either a fully homologous target template (SB-template) or with templates containing 1–4 base point mutation(s). The results are expressed as the delay in the threshold detection time (dt), i.e., the average Δdt =  average dt of a template containing point mutation(s) minus the average dt of the fully homologous target template (SB-template). ND denotes no detectable amplification of a template. SB-F21 and SB-R21 were the upstream and downstream primers, respectively. The invasion oligonucleotide (IO) used was SB-IO.