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. 2014 Nov 24;9(11):e113227. doi: 10.1371/journal.pone.0113227

Table 1. Gene details and diversity.

Locus Primer Label Primer Sequence (5′–3′) Locus Type Aligned Length PICa Individuals Sequenced
Kl-2 Kl2L TAATACAGAACGGTGGTATGGGTAT Y 571 63 60
kl2R GTTGCTTGGCTAATTCGTAAAGAGT
Fz4 Fz4L GCGTCTTTCTATTGCGCTACTAT X 974 89 55
Fz4R GCTTGTACGGACTGCTGATTATT
Snf snfL GAAGATGCGGGGCCARGCNTTYGT X 395 81 69
snfR GAACAGCATGGACAGCATCATYTCRTT
Yp1 YP1D-F GGACAGGATGAGGTNACCATCATTGT X 911 50 23
YP1D-R TGRTAGCTGTTCTGCTTCTGGGC
Yp2 YP2F CAGCAGCGTTACAATCTCCAGCC X 688 25 22
YP2R CCGAAGGGGCTCTTGGAGTTCAC
Pds5 Pds5L GGATACTTTGTGGACAATTCAGAGT autosomal 594 87 64
Pds5R AGATATTTCACGAACTCTTCAGCAC
Boss BossF1 ACCAGATGCCCTGGGGNGARAA autosomal 726 136 53
BossR1 TGGACAGGGAGCCGCKNARCCARTT
Ntid ntidF1 GGGCCGCATCTTCGARCAYAARTGG autosomal 567 98 69
ntidR1 TGGAGGGGTAGGTGTTCCARCARTA
Wee weeL GCCTGGGCCGAGGAYGAYCAYATG autosomal 297 40 56
weeR TCACGTGGCCCAGGTCNCCDATYTT
Ef1g EF1g26F GCTTWTGAGACCGCTGATGG autosomal 844 20 23
EF1g862R ATCTTRTCGAGACGCTGGAA
ND2 192 AGCTATTGGGTTCAGACCCC mito 523 132 69
732 GAAGTTTGGTTTAAACCTCC
ND4 FN4F GATACAGGAGCTTCTACATGAGC mito 687 79 23
FN4R GTTTGTGAAGGAGCATTAGG
COI 2183 CAACATTTATTTTGATTTTTTGG mito 831 201 71
3037 TYCATTGCACTAATCTGCCATATTAG
COII 3041 ATGGCAGATTAGTGCAATGG mito 765 167 70
3791 GTTTAAGAGACCAGTACTTG
16s 16sF CCGGTTTGAACTCAGATCACGT mito 511 27 69
16sR CGCCTGTTTAACAAAAACAT
Total 9884 1295

a) Number of parsimony informative characters.