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. 2014 Nov 24;9(11):e113811. doi: 10.1371/journal.pone.0113811

Table 3. Sampling results of GalaxyLoop-PS2 on the three test sets.

Framework Set (No. loop residue) No. loops No. loop sampled within1)
<1.0 Å <1.5 Å <2.0 Å
Crystal structure Set 1 (8) 20 19 20 20
Set 1 (12) 20 13 16 19
Set 2 (12) 33 20 27 28
Side chain-perturbed Set 1 (8) 20 14 16 17
Set 1 (12) 20 8 16 16
Backbone-perturbed Set 1 (8) 20 8 13 16
Set 1 (12) 20 6 14 16
1)

Number of loop targets for which at least one structure among the 30 loop conformations (or 50 conformations for 12-residue loops) in the final CSA bank is within a given RMSD value.