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. 2014 Oct 20;6:plu065. doi: 10.1093/aobpla/plu065

Table 3.

Allele information, heterozygosity and tests for the Hardy–Weinberg equilibrium for each locus in each population.aNumber of alleles observed in the population. bObserved heterozygosity. cExpected heterozygosity. dNumber of private alleles per locus, with frequency in parentheses. eProportion of loci with missing data, averaged over individuals. fHardy–Weinburg test includes degrees of freedom (df), Chi-square value, P-value and significance: ns, not significant; *P < 0.05, **P < 0.01, ***P < 0.001.

Population Locus name Naa Hob Hec PAd (frequency) Missinge Tests for Hardy–Weinburg equilibriumf
df χ2 P-value Significance
Orchard parents (N = 28) CM005 8.000 0.929 0.783 0 0 28 34.677 0.179 ns
CM008 7.000 0.893 0.798 0 0 21 19.617 0.546 ns
CM010 6.000 0.667 0.652 1 (0.019) 0 15 8.031 0.923 ns
CM018 10.00 0.815 0.762 1 (0.019) 0 45 33.842 0.888 ns
CM396 5.000 1.000 0.678 0 0 10 29.596 0.001 ***
CM467 3.000 0.852 0.647 0 0 3 7.078 0.069 ns
CM800 7.000 0.741 0.765 0 0 21 36.486 0.019 *
CM004 5.000 0.550 0.679 0 0.04 10 19.960 0.030 *
CM007 5.000 0.565 0.723 1 (0.022) 0.07 10 10.517 0.396 ns
CM883 4.000 0.481 0.488 0 0.04 6 4.150 0.656 ns
CM945 9.000 0.818 0.801 0 0.07 36 44.043 0.168 ns
Forest offspring (N = 72) CM005 8.000 0.881 0.790 0 0 28 31.201 0.308 ns
CM008 8.000 0.819 0.776 1 (0.007) 0 28 31.012 0.317 ns
CM010 5.000 0.754 0.683 0 0 10 13.208 0.212 ns
CM018 9.000 0.859 0.777 0 0 36 32.050 0.657 ns
CM396 6.000 0.871 0.635 1 (0.036) 0 15 40.196 0.000 ***
CM467 3.000 0.886 0.666 0 0 3 15.943 0.001 **
CM800 7.000 0.761 0.750 0 0 21 32.702 0.050 *
CM004 7.000 0.577 0.577 2 (0.024) 0.04 21 19.632 0.545 ns
CM007 4.000 0.473 0.604 0 0.014 6 12.467 0.052 ns
CM883 5.000 0.455 0.520 1 (0.009) 0.027 10 8.911 0.541 ns
CM945 11.00 0.892 0.819 2 (0.019) 0.014 55 51.033 0.627 ns