Table 1.
Summary of genes expressed preferentially in TCs, as compared with others
| Compared pairs/fold up-regulated | >0 | >1 | >4 | ||||
|---|---|---|---|---|---|---|---|
| TC5 versus others | 64 | 18 | 2 | ||||
| TC10 versus others | 56 | 13 | 4 | ||||
| TCs versus others | 26 | 6 | 2 | ||||
| Gene symbol | Folds (TC5 versus others/TC10 versus others) | ||||||
| Fibroblast | Stem | ATII | CD8_T_BL | CD8_T_LL | Basal_cell | Duct_cell | |
| (A) Genes up-regulated between 0-and 1-folds in TCs as compared with others | |||||||
| 1110008F13Rik | −0.41/−0.18 | −0.46/−0.25 | −0.73/−0.72 | −0.79/−0.80 | −0.85/−0.85 | −0.91/−0.91 | −0.91/−0.92 |
| 2310003F16Rik | −0.40/−0.04 | −0.49/−0.19 | −0.97/−0.97 | −0.52/−0.46 | −0.56/−0.50 | −0.82/−0.80 | −0.86/−0.84 |
| 2900064A13Rik | −0.13/−0.21 | −0.41/−0.46 | −0.37/−0.58 | −0.29/−0.54 | −0.30/−0.54 | −0.24/−0.51 | −0.19/−0.47 |
| Abl1 | −0.75/−0.67 | −0.43/−0.23 | −0.76/−0.76 | −0.29/−0.32 | −0.70/−0.71 | −0.82/−0.83 | −0.89/−0.90 |
| Ass1 | −0.44/−0.34 | −0.96/−0.95 | −0.82/−0.84 | −0.94/−0.95 | −0.80/−0.83 | −0.90/−0.92 | −0.80/−0.84 |
| Commd3 | −0.63/−0.13 | −0.63/−0.54 | −0.56/−0.62 | −0.78/−0.59 | −0.76/−0.60 | −0.13/−0.34 | −0.24/−0.65 |
| Commd7 | −0.29/−0.56 | −0.62/−0.91 | −0.58/−0.49 | −0.53/−0.99 | −0.54/−0.99 | −0.24/−0.87 | −0.60/−0.89 |
| Creb3l1 | −0.65/−0.66 | −0.93/−0.44 | −0.46/−0.35 | −0.99/−0.18 | −0.99/−0.52 | −0.86/−0.25 | −0.88/−0.29 |
| Dlgap4 | −0.79/−0.98 | −0.65/−0.96 | −0.44/−0.77 | −0.28/−1.00 | −0.58/−0.96 | −0.34/−0.37 | −0.38/−0.71 |
| Edf1 | −0.44/−0.17 | −0.40/−0.08 | −0.51/−0.73 | −0.78/−0.76 | −0.81/−0.61 | −0.26/−0.28 | −0.26/−0.66 |
| Id1 | −0.98/−0.70 | −0.97/−0.03 | −0.74/−0.20 | −0.99/−0.50 | −0.95/−0.45 | −0.27/−0.63 | −0.66/−0.59 |
| Manbal | −0.49/−0.51 | −0.43/−0.43 | −0.77/−0.34 | −0.79/−0.19 | −0.66/−0.19 | −0.37/−0.20 | −0.71/−0.25 |
| Mocs3 | −0.81/−0.53 | −0.38/−0.02 | −0.30/−0.90 | −0.55/−0.95 | −0.51/−0.95 | −0.67/−0.55 | −0.63/−0.57 |
| Psmc3 | −0.64/−0.46 | −0.58/−0.20 | −0.34/−0.29 | −0.17/−0.58 | −0.18/−0.36 | −0.18/−0.67 | −0.23/−0.93 |
| Sdccag3 | −0.44/−0.46 | −0.48/−0.60 | −0.76/−0.37 | −0.77/−0.98 | −0.74/−0.94 | −0.73/−0.45 | −0.67/−0.18 |
| Slc39a13 | −0.51/−0.59 | −0.28/−0.77 | −0.13/−0.42 | −0.46/−0.73 | −0.20/−0.75 | −0.58/−0.72 | −0.91/−0.80 |
| Snai1 | −0.84/−0.26 | −0.37/−0.15 | −0.92/−0.67 | −0.93/−0.74 | −0.95/−0.58 | −0.95/−0.40 | −0.97/−0.59 |
| Spc25 | −0.41/−0.37 | −0.24/−0.40 | −0.79/−0.91 | −0.61/−0.91 | −0.41/−0.91 | −0.19/−0.58 | −0.07/−0.85 |
| Tubb2c | −0.73/−0.59 | −0.84/−0.48 | −0.47/−0.40 | −0.74/−0.90 | −0.77/−0.89 | −0.73/−0.57 | −0.81/−0.74 |
| Srxn1 | −0.49/−0.68 | −0.71/−0.30 | −0.32/−0.86 | −0.96/−0.85 | −0.93/−0.83 | −0.69/−0.86 | −0.41/−0.93 |
| (B) Genes up-regulated between 1-and 4-folds in TCs as compared with other | |||||||
| Dbndd2 | −0.61/−1.00 | −0.66/−0.98 | −0.90/−0.73 | −0.96/−0.96 | −0.95/−0.96 | −0.83/−0.87 | −0.81/−0.90 |
| Fbn1 | −0.95/−0.98 | −0.84/−0.53 | −0.89/−0.84 | −0.95/−0.82 | −0.95/−0.84 | −0.66/−0.87 | −0.89/−0.76 |
| Tfpi | −0.60/−0.72 | −0.94/−0.58 | −0.85/−0.85 | −0.66/−0.95 | −0.73/−0.96 | −0.84/−0.78 | −0.82/−0.86 |
| Ak1 | −0.80/−0.74 | −0.84/−0.96 | −0.69/−0.93 | −1.00/−0.85 | −0.97/−0.87 | −0.94/−0.93 | −0.97/−0.92 |
| (C) Genes up-regulated between >4-folds in TCs as compared with others | |||||||
| Myl9 | −1.00/−0.96 | −0.92/−0.91 | −0.98/−0.92 | −1.00/−0.96 | −1.00/−0.98 | −0.98/−0.88 | −1.00/−0.94 |