Table 2.
Differentially expressed genes (FDR q ≤ 0.20) from transcriptome analysis of six samples combined – normal to LGSIL and LGSIL to HGSIL (Log2 transformed).
| Gene | Locus | Normal | LGSIL | Fold-change | p-Value | q-Value |
|---|---|---|---|---|---|---|
| Normal to LGSIL | ||||||
| C1orf120 | chr1:182376755-182383948 | 11.0013 | 0 | −inf | 5.00E-05 | 0.18 |
| EPGN | chr4:74979895-75196255 | 0 | 3.33617 | +inf | 5.00E-05 | 0.18 |
| NDRG4 | chr16:58497548-58547522 | 7.04797 | 85.1306 | 3.5944 | 5.00E-05 | 0.18 |
| LGSIL to HGSIL | ||||||
| ADH7 | chr4:100333417-100356525 | 2.89046 | 0 | −inf | 5.00E-05 | 0.18 |
| AX746562 | chr7:44406738-44408891 | 0 | 4.34595 | inf | 5.00E-05 | 0.18 |
| CRNN | chr1:152381718-152386750 | 194.411 | 2.41024 | −6.33379 | 5.00E-05 | 0.18 |
| FABP4 | chr8:82390731-82395473 | 237.894 | 15.9085 | −3.90245 | 5.00E-05 | 0.18 |
| SLN | chr11:107578108-107582787 | 0 | 25.907 | inf | 5.00E-05 | 0.18 |
| SPRR3 | chr1:152974222-152976332 | 350.506 | 14.4714 | −4.59817 | 5.00E-05 | 0.18 |