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. 2014 Nov 26;9(11):e113083. doi: 10.1371/journal.pone.0113083

Figure 3. Three shape modes characterize projected flatworm body shape dynamics.

Figure 3

A. Our custom-made MATLAB software tracks worms in movies and extracts worm boundary outline (red) and centerline (blue). B. The radial distance Inline graphic between the boundary points and midpoint of the centerline (Inline graphic, red dot) is calculated as a parameterization of worm shape. We normalize the radial distance profile of each worm by the mean radius Inline graphic. C. The second symmetry axis (dotted line) of the covariance matrix corresponds to statistically symmetric behavior of the worm with respect to its midline. D. The three shape modes with the largest eigenvalues account for 94% of the shape variations. The first shape mode characterizes bending of the worm and alone accounts for 61% of the observed shape variance. On the top, we show its normalized radial profile on the left as well as the boundary outline corresponding to the superposition of the mean worm shape and this first shape mode (solid red: Inline graphic, dashed red: Inline graphic, black: mean shape with Inline graphic). The second shape mode describe lateral thinning (Inline graphic), while the third shape mode corresponds unlike deformations of head and tail (Inline graphic), giving the worm a wedge-shaped appearance. E. The first shape mode with score Inline graphic describing worm bending strongly correlates with the instantaneous turning rate of worm midpoint trajectories. F. We manually selected 30 movies where worms clearly show inch-worming and 50 movies with no inch-worming behavior. The variance of score Inline graphic and Inline graphic increases for the inch-worming worms. G. The autocorrelation of mode Inline graphic and the crosscorrelation between mode Inline graphic and mode Inline graphic reveals an inch-worming frequency of approximately Inline graphic, hinting at generic behavioral patterns.