Table 1.
Overview of the sequencing and assembly.
HS4 | CK | All | |
---|---|---|---|
Total Clean Reads | 64,611,114 | 68,888,892 | |
Total Clean Nucleotides | 5,815,000,260 | 6,200,000,280 | |
Q20 percentage | 96.30% | 96.20% | |
N percentage | 0.01% | 0.01% | |
GC percentage | 44.78% | 44.59% | |
Contig | |||
Total Number | 738,481 | 620,759 | |
Total Length(nt) | 99,461,549 | 82,873,556 | |
Mean Length(nt) | 135 | 134 | |
N50 | 116 | 116 | |
Unigene | |||
Total Number | 130,421 | 109,624 | 119,573 |
Total Length(nt) | 47,236,810 | 39,455,066 | 56,628,880 |
Mean Length(nt) | 362 | 360 | 474 |
N50 | 410 | 406 | 548 |