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. 2014 Nov 27;45(1):104. doi: 10.1186/s13567-014-0104-9

Table 3.

Summary of the differential expression analysis performed with edgeR tool ( P -value < 0.05)

Comparison Up Down Total 4 Genome (%)
1B vs 2P 212 213 425 19
B vs 3S 538 571 1109 49
P vs S 376 417 793 35

1Biofilm.

2Planktonic.

3Stationary phase.

42259 of the 2317 annotated protein-coding genes were taken as total (at least one count per million (cpm) in at least two samples).

Percentages of differentially expressed genes are also shown for each comparison.