Table 1. Sites of cleavage by directed hydroxyl radical probing.
| Site of cleavage | Position of cysteine residue introduced | |||
|---|---|---|---|---|
| mRNA + 0 | mRNA + 21 | |||
| −RF2 | +RF2 | −RF2 | +RF2 | |
| 511–513 | 30, 47–50 | 30,47–50 | 30 | 30 |
| 520–521 | 2, 3, 22 | |||
| 531–532 | 2–6, 18, 22, 30–42 | 30 | 30 | 30 |
| 533–535 | 30, 47–50 | 30–34, 38, 39, 42, 47–50 | 30 | 30 |
| 1053–1055 | 2–32, 42 | 28 | 18, 42 | 18, 42 |
| 1195–1197 | 2–32, 36–39, 47, 50 | |||
| 1215 | 2–32 | |||
| 1230–1231 | 2–32 | |||
| 1398 | 2–6, 15, 18, 22, 26–30 | 26–30 | ||
| 1411–1412 | 6, 15, 18, 22, 27 | 15, 18, 22, 26 | 18 | 18 |