Table 3. Contigs observed in ODA14p2 and ODA14p4.
| Passage | Contig | Junctions | Microhomology (bp) | Length of fragments (bp) | Distance (kb) |
|---|---|---|---|---|---|
| p2 | 1 | a11b - a16b | 3 - 0 | 61 | 170 |
| 2 | a14b - a36b | 0 - 0 | 66 | 105 | |
| 3 | a15b - a34b | 0 - 0 | 22 | 60 | |
| 4 | a55b - a47b | 0 - 0 | 28 | 815 | |
| 5 | a2b - a21b - b23a | 0 - 0 - 0 | 222 - 1386 | 782 - 10 | |
| 6 | b18a - a19b - a53b | 6 - 2 - 1 | 36 - 64 | na - 1232 | |
| 7 | b8a - a9b - b13a - a12b - a5b - a26b | 2 - 1 - 1 - 0 - 0 - 0 | 128 - 160 - 293 - 316 - 326 | 116 - 1.5 - 719 - 188 - 737 | |
| p2 / p4 | 8 | a24b - b7a | 3 - 0 | 290 | 190 |
| 9 | a4b - b3a - a6b - a22b | 2 - 1 - 0 - 4 -2 -2 | 108 - 2,118 - 67 | 0.14 - 376 - 235 | |
| b31a - a32b | |||||
| 10 | b39a - a38b - b30a - a29b -b10a | 0 - 0 - 2 - 0 -5 | 386 - 171 - 126 - 329 - 244 - 348 | 17 - 197 - 6 - 333 - 10 - 369 | |
| p4 | 11 | a73b - a83b - a35b | 2 - 2 - 3 | 71 - 224 | 565 - 21 |
| 12 | a74b - a85b | 0 - 2 | 30 | na | |
| 13 | a75b - a69b | 2 - 1 | 72 | 621 | |
| 14 | a78b - a77b | 2 - 0 | 35 | 12 | |
| 15 | b92a- b98a | 0 - 0 | 20 | 91 | |
| 16 | a82b - a80b | 0 - 0 | 109 | 18 | |
| 17 | a88b - b81a | 2 - 2 | 948 | na | |
| 18* | b91a - b99a - b103a -a102b -a104b - b94a - b101a - b100a - b87a | 2 - 0 - 2 - 1 - 0 - 2 - 0 - 0 | 257 - 35 856 - 14 115 - 1258 - 1168 - 4331 - 21 471 - 72 238 | 2077 - 3297- 998 - 1000 - 1956 - 949 - 2588 - na |
Junctions: junctions involved, a and b designate the two arms (Supplementary Tables S1 and S2). The microhomologies present at junctions and the length of each fragment, in bp, are indicated. Distance: distance between fragments in the normal genome (in kb); when a single fragment is present, this value corresponds to the distance between the breakpoint of each junction that does not border the fragment.