Table 2. Structural search of known motifs within the RNA motif atlas. The table summarizes the number of found motifs compared with FR3D (http://rna.bgsu.edu/rna3dhub/motifs). See SD Text 11 for a full list.
| Motif | Reference PDB | Found motifs | False positive |
|---|---|---|---|
| T-LOOP | 3RG5 | 57/66 | 17 |
| GNRA | 4A1B | 217/219 | 63 |
| C-LOOP | 3V2F | 18 /22 | 7 |
| D-SHEAR | 1SAQ | 23/26 | 3 |
| T-SHEAR | 3V2F | 24/31 | 18 |
| K-TURN | 3GX5 | 10/22 | 15 |
| SARCIN | 1Q96 | 13/16 | 3 |