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. 2014 Nov 28;5:668. doi: 10.3389/fpls.2014.00668

Table 3.

Twenty seven reactions for which change in gene expression correlates with difference in flux between accessions 3170 and 3231.

index Abbreviation; name Lower/upper flux bound responsiveness Reaction level differential expression
26 PFK_c;phosphofructokinase N;S (S)()()()()*
55 RPI_p;ribose-5-phosphate isomerase T;T (T)()
93 PiC_c_m;phosphate carrier T;T ()()(T)
95 H_PYR_sym_c_p;pyruvate transport T;T (T)
252 ADEK_c;adenosine kinase T;T ()(T)
255 SHMT_c;glycine hydroxymethyltransferase T;T ()()(X)()()(TT)
284 ABUTsynth_p;acetolactate synthase T;T (T)()()
294 IPMDY_p;3-isopropylmalate dehydratase T;T (TT)()(X)(T)
295 IPMD_p;3-isopropylmalate dehydrogenase T;T (X)(T)()
312 ACLACsynth_p;acetolactate synthase T;T (T)()()
318 ASUCS_p;adenylosuccinate synthase T;T (T)
320 IMPsynth_p;IMP cyclohydrolase T;T (T)
333 Phesynth_p;arogenate dehydratase T;T ()()()()(X)(TT)
335 HOM_p;homoserine dehydrogenase T;T ()(TT)
337 AK_p;aspartate kinase T;T ()()(TT)()()
340 DHS_p;3-deoxy-7-phosphoheptulonate synthase T;T (TT)()()
344 starchsynth_p;starch synthase S;S ()()(S)(SSS)(SS)()()()()
348 PURH_p;phosphoribosylaminoimidazolecarboxamide formyltransferase T;T (T)
355 Glysynth_p;glycine hydroxymethyltransferase T;T ()()(X)()(T)()(TT)
357 IGLPS_p;indole-3-glycerol-phosphate synthase T;T ()(T)
361 Thrsynth_p;threonine synthase T;T ()(TT)
456 SUCLA_m;Succinate-CoA ligase (ADP-forming) T;T ()(T)()
458 GDC2_m;aminomethyltransferase S;S (S)
499 ACCase_c;acetyl-CoA carboxylase T;T (T)
541 PDHa_m;dihydrolipoyllysine-residue acetyltransferase S;S (S)(S)()
576 CMK_p;4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1 T;T (T)
621 DHCRed_c;7-dehydrocholesterol reductase T;T (TTTT)

Flux Variability Analysis for 3170 and 3231 (loopless algorithm) using flux ratios and flux constraints derived from 13C-Metabolic Flux Analysis.

*

transcript level significance calls are aggregated at the gene level in parentheses. “(X)” means that no associated transcripts were found for an Arabidopsis gene identifier in bna572+. See also Supplementary Table 3B.