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. 2014 Jul 28;15(1):631. doi: 10.1186/1471-2164-15-631

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© Sigurgeirsson et al.; licensee BioMed Central Ltd. 2014

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Antisense RNA of PTENP1. Antisense transcription of the pseudogene PTENP1. The RefSeq annotation includes only one isoform (top annotation track) while the Ensembl annotation does not have this transcript annotated. Our data, based on Cufflinks assembly, suggest two alternative isoforms for this transcript labeled PTENP1-AS2 and PTENP1-AS3. The PTENP1-AS2 isoform includes a novel exon, higlighted by a red arrow, which overlaps ensembl annotation of other genes. It is suggested here that this ensembl annotation is wrong and that these genes are part of the PTENP1-AS gene. *The Cufflinks assembly shown here has been cleaned up a bit. For the direct output delivered by Cufflinks see Additional file 12.