Table 1.
Gene ID, FPKM values and annotation of the 36 genes that found to be differentially expressed in all tested conditions
| FPKM | ||||||
|---|---|---|---|---|---|---|
| Gene ID | Annotation | CT | CH | NAR | CHSTOP | NARSTOP |
| Eucgr.F04479.1 | HSP20 | 0.12 | 35.55 | 40.44 | 23.84 | 57.92 |
| Eucgr.K02389.1 | Unknown | 0.04 | 13.69 | 10.18 | 9.89 | 26.99 |
| Eucgr.K02399.1 | Unknown | 0.08 | 18.09 | 18.67 | 19.48 | 53.82 |
| Eucgr.G01188.2 | EGY3 | 2.78 | 45.78 | 41.56 | 33.40 | 76.35 |
| Eucgr.J01979.1 | HSP18.2 | 0.34 | 17.61 | 19.94 | 14.63 | 27.21 |
| Eucgr.K02410.1 | Unknown | 0.13 | 14.27 | 10.66 | 12.52 | 29.61 |
| Eucgr.J01980.1 | HSP18.2 | 0.02 | 12.20 | 11.59 | 9.15 | 26.39 |
| Eucgr.L02233.1 | no hit | 1.29 | 41.47 | 38.15 | 29.24 | 118.40 |
| Eucgr.F02898.1 | HSP20 | 2.76 | 525.99 | 343.17 | 280.68 | 342.59 |
| Eucgr.J01985.1 | HSP18.2 | 0.31 | 22.25 | 16.62 | 13.21 | 33.33 |
| Eucgr.K03553.1 | STS | 0.04 | 4.11 | 4.59 | 2.83 | 6.87 |
| Eucgr.L03261.1 | HSP18.2 | 1.44 | 47.41 | 27.81 | 19,98 | 75,67 |
| Eucgr.C03449.1 | HSFA2 | 0.29 | 14.55 | 12.98 | 14.36 | 18.58 |
| Eucgr.C00684.1 | HSP17.6II | 2.00 | 341.30 | 299.30 | 243.65 | 272.90 |
| Eucgr.K02384.1 | unknown | 0.07 | 14.56 | 10.59 | 10.60 | 27.23 |
| Eucgr.J01969.1 | HSP20 | 4.89 | 192.23 | 134.53 | 103.09 | 310.44 |
| Eucgr.K03472.1 | ARATH | 0.07 | 109.57 | 84.15 | 62.04 | 20.94 |
| Eucgr.H04513.1 | HSP70 | 0.23 | 15.72 | 18.79 | 11.56 | 21.62 |
| Eucgr.A00595.1 | PEBP | 0.10 | 81.17 | 76.66 | 57.33 | 98.83 |
| Eucgr.E02421.1 | Unknown | 0.19 | 260.04 | 220.12 | 119.63 | 51.05 |
| Eucgr.H04692.1 | HSP21 | 2.97 | 83.31 | 59.57 | 43.11 | 313.22 |
| Eucgr.G02440.1 | UGT73B2 | 0.00 | 5.46 | 5.80 | 3.33 | 4.06 |
| Eucgr.G02259.1 | UGT73B3 | 0.00 | 2.73 | 2.14 | 1.18 | 3.10 |
| Eucgr.J01959.1 | HSP18.2 | 3.19 | 142.90 | 89.76 | 58.22 | 148.21 |
| Eucgr.K00295.1 | HSP90.1 | 2.11 | 46.13 | 38.25 | 35.52 | 62.69 |
| Eucgr.A01833.1 | AAC3 | 0.13 | 32.00 | 24.43 | 15.08 | 10.47 |
| Eucgr.C03071.1 | HSP17.6II | 3.64 | 517.08 | 509.51 | 451.66 | 324.54 |
| Eucgr.B03843.1 | No hit | 1.45 | 93.17 | 63.39 | 67.61 | 20.77 |
| Eucgr.C03320.1 | DUF1677 | 0.38 | 24.39 | 18.22 | 14.01 | 9.78 |
| Eucgr.B00176.2 | PIMT2 | 3.86 | 153.25 | 109.01 | 82.97 | 57.39 |
| Eucgr.J02588.1 | No hit | 3.20 | 225.90 | 182.76 | 194.01 | 130.04 |
| Eucgr.C00690.1 | HSP17.6II | 2.48 | 563.68 | 498.40 | 514.67 | 458.94 |
| Eucgr.K00237.1 | PEBP | 0.04 | 115.83 | 64.41 | 61.47 | 11.49 |
| Eucgr.F03196.1 | GSTU25 | 1.43 | 292.73 | 240.63 | 168.71 | 38.29 |
| Eucgr.I02136.1 | HSP20 | 1.68 | 226.73 | 147.43 | 90.02 | 259.35 |
| Eucgr.H04427.1 | MEE32 | 49.92 | 0.52 | 0.85 | 1.32 | 13.93 |
A total of 36 genes were differentially expressed in all four conditions. FPKM -fragments per kilobase of exon per million fragments mapped. CT – control; CH – prolonged naringenin-chalcone supp; NAR – prolonged naringenin supp; CHSTOP- short-term naringenin-chalcone supp; NARSTOP – short-term naringenin supp.
Abbreviations: HSP20 HSP20-like chaperone superfamily protein, unknown unknown protein, EGY3 ethylene-dependent gravitropism-deficient and yellow-green-like 3, HSP18.2 heat shock protein 18.2, HSP20 HSP20-like chaperones superfamily protein, STS stachyose synthase, HSFA2 heat shock transcription factor A2, HSP17.6II 17.6 kDa class II heat shock protein, ARATH Adenine nucleotide alpha hydrolases-like superfamily protein, HSP70 BIP1heat shock protein 70 family protein, PEBP phosphatidylethanolamine-binding protein family protein, HSP21 heat shock protein 21, UGT73B2 UDP-glucosyltransferase 73B2, UGT73B3UDP glucosyl transferase 73B3, HSP90.1 heat shock protein 90.1, AAC3 ADP/ATP carrier 3, DUF1677 protein of unknown function, PIMT2 protein-l-isoaspartate methyltransferase 2, GSTU25 glutathione S-transferase TAU 25, MEE32 dehydroquinate dehydratase, putative/shikimate dehydrogenase.