Table 8.
De novo assembly statistics for the Caenorhabditis elegans dataset
N50 | NG50 | Edits/100 kbp | Misassemblies | Coverage (%) | |
---|---|---|---|---|---|
Original | 17,330 | 17,317 | 27.66 | 441 | 94.873 |
Quake | 13,887 | 13,668 | 27.19 | 559 | 94.320 |
SOAPec | 19,369 | 19,457 | 25.71 | 449 | 95.308 |
Musket | 18,761 | 18,917 | 28.02 | 438 | 95.288 |
BLESS | 17,673 | 17,693 | 29.24 | 524 | 94.968 |
Lighter | 19,222 | 19,333 | 26.9 | 434 | 95.332 |