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. 2014 Jun 4;10(7):2648–2657. doi: 10.1021/ct5002363

Figure 5.

Figure 5

Comparison of MCL macrostate models for a subdomain of the CBD with and without cAMP-bound at different MCL-p values. Color-coding of the microstates identifies macro states membership. Microstate nodes are plotted based on the RMSD of the cluster generator from two reference structures and the node diameters are proportional to the log of their proportional equilibrium population.