TABLE 2.
Comparison of mRNA levels in C. acetobutylicum wild type and rex-inactivated mutant using qRT-PCR
| Gene name | Gene identifier | mRNA ratioa (rex mutant/WTb) |
|---|---|---|
| adhE2 | CAP0035 | 164.75 ± 6.45 |
| ldh | CAC0267 | 13.75 ± 0.84 |
| thlA | CAC2873 | 12.46 ± 2.34 |
| crt | CAC2712 | 2.43 ± 0.10 |
| bcd | CAC2711 | 2.81 ± 0.78 |
| etfB | CAC2710 | 2.17 ± 0.20 |
| etfA | CAC2709 | 1.55 ± 0.14 |
| hbd | CAC2708 | 2.79 ± 0.37 |
| ptb | CAC3076 | 6.07 ± 1.35 |
| buk | CAC3075 | 1.97 ± 0.12 |
| nadA | CAC1025 | 2.53 ± 0.38 |
| nadB | CAC1024 | 1.79 ± 0.12 |
| nadC | CAC1023 | 1.79 ± 0.26 |
| asrT | CAC1512 | 2.04 ± 0.72 |
| asrA | CAC1513 | 2.41 ± 0.74 |
| asrB | CAC1514 | 2.67 ± 0.36 |
| asrC | CAC1515 | 1.69 ± 0.48 |
Data represent means ± standard deviations of values of mRNA ratios obtained from six measurements starting from two independent cultures. The strains were cultivated in P2 minimal medium, and total RNA was isolated in the exponential growth phase at an OD600 of about 2.0. The P value of the mRNA ratios for all the genes studied is smaller than 0.01.
WT, wild type.