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. 2014 Nov;88(21):12623–12643. doi: 10.1128/JVI.01705-14

TABLE 4.

Estimated log-odds ratios for interactions between virus and plasma cladea

Virus clade Plasma sample-infecting strain clade
CRF07 CRF01 CRF02 Clade A Clade B Clade C Clade D
CRF07 1.288a −0.532 NSb NS −0.494 0.700 0.389c
CRF01 −0.546 1.295 −0.739 NS NS NS 0.137
CRF02 −0.473 0.877 1.184 NS −0.304 −0.363 0.680
Clade A NS −1.184 NS 0.895 0.316 NS 0.245
Clade B −0.224 −0.750 NS NS 0.802 −0.230 0.795
Clade C 0.742 −0.680 NS NS −0.219 0.430 0.087
Clade D −1.116 NS NS NS NS NS 1.346
Clade G 0.501 0.460 0.265 0.440 0.085 0.007 0.878
a

Bold values indicate where the clade of the infecting strain of the plasma samples matches that of the test viruses. Only statistically significant interactions are shown. Positive values among within-clade interactions indicate that plasma samples and viruses from the same clade typically increase the proportion of ID50 values above the median value of 28; the value indicates the magnitude of the effect. Most off-diagonal estimates are negative, which indicates that a mismatch between plasma sample and virus clades decreases the proportion of ID50 values above the median ID50. Because the estimated effects for each factor total zero, some estimates are determined by the others; italicized values are implied by the zero-total contrast and do not have an estimated standard deviation or P value.

b

NS, not significant.