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. 2014 Dec;82(12):5286–5292. doi: 10.1128/IAI.02537-14

TABLE 3.

Detection of strain-specific alleles in experimental strain pairs

Locus Strains Allele identifieda
St. Maries Florida Washington-Okanogan Common allele
omp5 St. Maries and Florida + + No
St. Maries and Washington-Okanogan + + Yes
Florida and Washington-Okanogan + + No
omp9 St. Maries and Florida + + No
St. Maries and Washington-Okanogan + + No
Florida and Washington-Okanogan + + No
omp12 St. Maries and Florida + + No
St. Maries and Washington-Okanogan + + No
Florida and Washington-Okanogan + + Yes
omp13 St. Maries and Florida + + No
St. Maries and Washington-Okanogan + + No
Florida and Washington-Okanogan + + Yes
omp14 St. Maries and Florida + + No
St. Maries and Washington-Okanogan + + No
Florida and Washington-Okanogan + + No
a

Identification based on a percentage of sequences perfectly matching the specific allele greater than 3 standard deviations above the technical error level based on identically sequenced cloned omp loci.