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. 2014 Dec 1;9(12):e114118. doi: 10.1371/journal.pone.0114118

Table 1. Frequency table of nirK (K), nirS (S) and nosZ (Z) co-occurrence types and taxonomic affiliation at phylum level as well as the percentage of organisms within each phylum that also harbor a nor gene.

Phylum K %nor KS %nor KSZ %nor KZ %nor S %nor SZ %nor Z %nor
Actinobacteria 102 42 0 - 0 - 0 - 0 - 0 - 0 -
Aquificae 0 - 0 - 0 - 0 - 0 - 2 100 0 -
Ascomycota 27 67 0 - 0 - 0 - 0 - 0 - 0 -
Bacteroidetes 8 100 0 - 1 0 24 67 0 - 0 - 24 17
Chlorobi 0 - 0 - 0 - 0 - 0 - 0 - 2 0
Chloroflexi 5 0 0 - 0 - 1 0 2 0 0 - 2 0
Crenarchaeota 0 - 0 - 0 - 0 - 2 100 2 100 0 -
Deferribacteres 0 - 0 - 0 - 0 - 0 - 0 - 1 0
Deinococcus-Thermus 0 - 2 100 0 - 0 - 3 100 0 - 0 -
Euryarchaeota 5 60 0 - 0 - 4 100 0 - 0 - 5 0
Firmicutes 16 25 0 - 0 - 4 100 0 - 1 100 8 12
Gemmatimonadetes 0 - 0 - 0 - 1 0 0 - 0 - 0
Nitrospirae 1 0 0 - 0 - 0 - 1 100 0 - 0
Planctomycetes 1 0 0 - 0 - 0 - 0 - 0 - 0
Proteobacteria 135 66 2 100 5 100 96 96 12 92 74 99 47 51
Spirochaetes 2 50 0 - 0 - 3 33 0 - 1 100 3 67
Thaumarchaeota 9 0 0 - 0 - 0 - 0 - 0 - 0 -
Verrucomicrobia 3 67 0 - 0 - 1 0 0 - 0 - 2 0

Residuals are according to Pearson Chi-squared test (P<0.001).

Combinations with Pearson residuals >2.

Combinations with Pearson residuals <−2.