Table 1. Frequency table of nirK (K), nirS (S) and nosZ (Z) co-occurrence types and taxonomic affiliation at phylum level as well as the percentage of organisms within each phylum that also harbor a nor gene.
Phylum | K | %nor | KS | %nor | KSZ | %nor | KZ | %nor | S | %nor | SZ | %nor | Z | %nor |
Actinobacteria | 102↑ | 42 | 0 | - | 0 | - | 0↓ | - | 0 | - | 0↓ | - | 0↓ | - |
Aquificae | 0 | - | 0 | - | 0 | - | 0 | - | 0 | - | 2↑ | 100 | 0 | - |
Ascomycota | 27↑ | 67 | 0 | - | 0 | - | 0↓ | - | 0 | - | 0 | - | 0↓ | - |
Bacteroidetes | 8↓ | 100 | 0 | - | 1 | 0 | 24↑ | 67 | 0 | - | 0↓ | - | 24↑ | 17 |
Chlorobi | 0 | - | 0 | - | 0 | - | 0 | - | 0 | - | 0 | - | 2↑ | 0 |
Chloroflexi | 5 | 0 | 0 | - | 0 | - | 1 | 0 | 2↑ | 0 | 0 | - | 2 | 0 |
Crenarchaeota | 0 | - | 0 | - | 0 | - | 0 | - | 2↑ | 100 | 2↑ | 100 | 0 | - |
Deferribacteres | 0 | - | 0 | - | 0 | - | 0 | - | 0 | - | 0 | - | 1↑ | 0 |
Deinococcus-Thermus | 0↓ | - | 2↑ | 100 | 0 | - | 0 | - | 3↑ | 100 | 0 | - | 0 | - |
Euryarchaeota | 5 | 60 | 0 | - | 0 | - | 4 | 100 | 0 | - | 0 | - | 5↑ | 0 |
Firmicutes | 16 | 25 | 0 | - | 0 | - | 4 | 100 | 0 | - | 1 | 100 | 8↑ | 12 |
Gemmatimonadetes | 0 | - | 0 | - | 0 | - | 1 | 0 | 0 | - | 0 | - | 0 | |
Nitrospirae | 1 | 0 | 0 | - | 0 | - | 0 | - | 1↑ | 100 | 0 | - | 0 | |
Planctomycetes | 1 | 0 | 0 | - | 0 | - | 0 | - | 0 | - | 0 | - | 0 | |
Proteobacteria | 135↓ | 66 | 2 | 100 | 5 | 100 | 96↑ | 96 | 12 | 92 | 74↑ | 99 | 47 | 51 |
Spirochaetes | 2 | 50 | 0 | - | 0 | - | 3 | 33 | 0 | - | 1 | 100 | 3 | 67 |
Thaumarchaeota | 9↑ | 0 | 0 | - | 0 | - | 0 | - | 0 | - | 0 | - | 0 | - |
Verrucomicrobia | 3 | 67 | 0 | - | 0 | - | 1 | 0 | 0 | - | 0 | - | 2 | 0 |
Residuals are according to Pearson Chi-squared test (P<0.001).
Combinations with Pearson residuals >2.
Combinations with Pearson residuals <−2.