Table 2.
Nucleotide sequence identity matrix of JKB5-R (KP015741) with selected virus isolates.
| Virus isolates | Location | Accession # | Size (nt) | Identity matrix (%) |
|---|---|---|---|---|
| CLCuV-JKA2-P | Punjab | KP015742 | 1351 | 91.5 |
| CLCuV-JK B2H | Haryana | KP015743 | 1350 | 93.0 |
| CLCuV | Pakistan | AM774307 | 1351 | 91.6 |
| CLCuV | Pakistan | FN554724 | 1349 | 91.5 |
| CLCuV | Pakistan | FJ607041 | 1354 | 91.0 |
| CLCuV | Rajasthan | GQ370388 | 1350 | 91.1 |
| CLCuV | Rajasthan | GQ369730 | 1351 | 92.5 |
| CLCuV | Rajasthan | JF502375 | 1419 | 93.3 |
| CLCuV | Punjab | Q191161 | 1350 | 91.4 |
| CLCuV | Punjab | JF502377 | 1351 | 90.5 |
| CLCuV | Punjab | JF502381 | 1415 | 91.7 |
| CLCuV | Haryana | AY795608 | 1415 | 95.6 |
| CLCuV | Haryana | JF502398 | 1354 | 89.1 |
| CLCuV | Haryana | AY744380 | 1374 | 98.1 |
| CLCuV | Lucknow | GQ369731 | 1359 | 90.0 |
| CLCuV | Lucknow | KM065438 | 1371 | 97.0 |
| CLCuV | New Delhi | KM070822 | 1371 | 98.7 |
| CLCuV | Bangalore | AY705381 | 1355 | 82.0 |
| CLCuV | Sudan | AY077797 | 1348 | 47.8 |
| BYVMV | Tamilnadu | AJ308425 | 1352 | 55.2 |
| BYVMV | West Bengal | EF417919 | 1354 | 55.5 |
| BYVMV | Maharashtra | GU233520 | 1358 | 55.3 |
| OLCuV | New Delhi | GQ245761 | 1351 | 55.8 |
| ToLCV | Rajasthan | AY438558 | 1371 | 51.7 |