Table 1.
Covering BAC clones and position of 13 genes and sequence of Q-PCR primers of LINE1 and 13 genes over 3q25.3-qter.
| Genes | BAC clones | Position | Forward primer | Reverse primer |
| LINE1 | - | - | CCGCTCAACTACATGGAAACTG | GCGTCCCAGAGATTCTGGTATG |
| SSR3 | 304C15 | 3q25.31 | GCCCAGGCATATGAGAGTTGTC | CCAACATGGCAGGGTCAAGT |
| CCNL1 | 6F2 | 3q25.31 | TCATGGCAGTCAACCAACAT | CCATTGTAAGGGCTTTTGGA |
| SMC4L1 | 227J5 | 3q26.1 | GGCAAAGTCCTAAGCAAGGTTGT | TCAACTGGCAAGCTAAGTGGAA |
| EVI1 | 141C22 | 3q26.2 | CATGCATGCTGATTGCAGAAC | CCACCTGCCGCAAAATGGT |
| hTERC | 40O08 | 3q26.2 | CGTAGGCGCCGTGCTTT | TTTTCCGCCCGCTGAA |
| SKIL | 543D10 | 3q26.2 | GCTCGGCATTCCCAAGAAA | CCCCTTCCAACACAGTCTGAGT |
| EIF5A2 | 110O7 | 3q26.2 | GGCTTCCAGCACTTACCCTATG | GACCATGCTTTCCAGTTTTGG |
| ECT2 | 453J16 | 3q26.31 | CCTAACAGCAATCGCAAACG | CTGTCTCTCTTGAAAGCTGAGCAA |
| PIK3CA | 245C23 | 3q26.32 | GGAGGATGCCCAATTTGATG | AACAGTCCATTGGCAGTTGAGA |
| EIF4G1 | 481O2 | 3q27.1 | CCGGTTCCAGAATCTGAGTTTT | GATTCGGAGGGGCAAGCTG |
| SST | 211G3 | 3q27.3 | GATGCCCTGGAACCTGAAGA | GCCGGGTTTGAGTTAGCAGAT |
| TP63 | 313I6 | 3q28 | CCTCGTCCACCAGTCCCTAT | GGAAGGACACGTCGAAACTG |
| TFRC | 313F11 | 3q29 | CAAAGTGGCACGAGCAGCTG | GCTCTAGAATGAACGGTGGAAG |
LINE1: long interspersed elements; SSR3: signal sequence receptor gamma; CCNL1: cyclin L1; SMC4L1:structural maintenance of chromosomes 4-like 1; EVI1: ecotropic viral integration site 1; hTERC: human telomerase RNA component; SKIL: Ski-like protein; EIF5A2: eukaryotic translation initiation factor 5A2; ECT2: epithelial cell transforming sequence 2 oncogene; PIK3CA: phosphoinositide-3-kinase, catalytic, alpha polypeptide; EIF4G1: eukaryotic translation initiation factor 4gamma1; SST: somatostatin; TP63:tumor protein 63; TFRC: transferrin receptor. BAC clones, clones of bacterial artificial chromosomes covering the genes obtained from RPCI-11 library.