Table 3. Canine oral isolate secondary colonization potential measured by quantitative PCR with Neisseria zoodegmatis COT-349 present as primary colonizer.
Range in fold change (minimum and maximum Cq) | |||||
Strain | Mean Cq | Standard deviation of mean Cq | Mean fold change (relative to LOQ) | min | max |
Actinomyces canis | 16.41 | 0.52 | 698629 | 466798 | 929400 |
Bacteroides sp. COT-040 | 36.94 | 0.00 | 1 | 1 | 1 |
Bergeyella zoohelcum COT-186 | 35.47 | 0.00 | 1 | 1 | 1 |
Pasteurellaceae sp. COT-080 | 24.36 | 0.86 | 796 | 483 | 1536 |
Fusobacterium sp. COT-189 | 26.60 | 6.50 | 84 | 2 | 13421 |
Leucobacter sp. | 25.99 | 2.40 | 569 | 144 | 3608 |
Moraxella sp. COT-017 | 21.90 | 1.48 | 17527 | 8143 | 56001 |
Peptostreptococcaceae XI [G-2] sp. COT-047 | 20.61 | 0.34 | 80871 | 63538 | 101849 |
Porphyromonas gingivicanis COT-022 | 18.58 | 1.00 | 87868 | 39773 | 143013 |
Porphyromonas sp. COT-108 | 27.04 | 4.72 | 148 | 16 | 6330 |
Xenophilus COT-264 | 29.32 | 2.10 | 36 | 33 | 134 |
Values are based on analysis of three biological replicates.