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. 2014 Dec 2;9(12):e114253. doi: 10.1371/journal.pone.0114253

Table 9. Evaluation for S.pombe real short reads data (D6, 52×).

Contigs Scaffolds
k/O N50 (kbp) Cov. (%) Misass. (#/sum) N50 (kbp) Cov. (%) Misass. (#/sum) Time (min) Mem. (GB)
PERGA O≧25 37.0 98.97 17/71k 70.3 98.97 17/73k 7 1.7
IDBA-UD default 32.1 98.54 28/140k 54.0 97.56 35/247k 31 1.3
ABySS k = 45 33.3 98.20 44/73k 35.7 96.29 48/230k 21 0.8
Velvet k = 45 28.7 97.36 26/175k 42.3 95.86 29/391k 6 3.9
SGA O≧31 21.3 97.10 16/38k 39.1 97.32 21/100k 114 2.0
CABOG default 22.3 95.12 8/71k 49.4 98.95 11/396k 705 7.3
MaSuRCA default 36.2 97.0 17/210k 64.7 93.71 20/672k 70 2.7