Table 1.

PIC and gene diversity as revealed by 580 SNPs selected compared to their entire counterparts

	MAF	Gene diversity	Heterozygosity	PIC
1057 SNPs
Temperate	0.256	0.302	0.008	0.268
IITA	0.202	0.252	0.038	0.218
CIMMYT	0.223	0.278	0.039	0.238
INERA	0.211	0.282	0.048	0.232
Subset A	0.199	0.263	0.044	0.219
Subset B	0.205	0.263	0.055	0.222
580 SNPs
Temperate	0.306	0.348	0.01	0.305
IITA	0.287	0.348	0.053	0.295
CIMMYT	0.314	0.372	0.054	0.311
INERA	0.321	0.408	0.071	0.326
Subset A	0.305	0.383	0.067	0.312
Subset B	0.302	0.37	0.079	0.307