Skip to main content
. Author manuscript; available in PMC: 2016 Jan 1.
Published in final edited form as: Biophys Chem. 2014 Sep 7;0:16–24. doi: 10.1016/j.bpc.2014.08.009

Table 1.

Summary of the MD simulation trajectories and the corresponding parameters used in this study.

Simulation No. No. of FF molecules Charged termini Water molecules Total atoms Electric field (kcal/(mol Å e)) Simulation time (ns)
1 1 No 665 2038 0 68.1
2 1 Yes 665 2038 0 91.3
3 1 Yes 665 2038 10 85.9
4 1 Yes 665 2038 20 76.3
5 1 Yes 665 2038 40 83.9
6 1 Yes 665 2038 60 79.8
7 1 Yes 665 2038 80 75.7
8 1 Yes 665 2038 100 81.2
9 64 Yes 11582 37498 0 9.44
10 64 Yes 11582 37498 10 10.00