Table 1.
Isolates used in this study and their GenBank accession numbers. Bold accession numbers were generated in other studies.
| Name | Old name | Strain number1 | Status2 | Host / Substrate | Locality | GenBank accesion numbers |
||||
|---|---|---|---|---|---|---|---|---|---|---|
| ITS | GAPDH | Alt a 1 | TEF1 | RPB2 | ||||||
| Alternaria acalyphicola | CBS 541.94; E.G.S. 38.100; IMI 266969 | T | Acalypha indica | Seychelles | KJ718097 | KJ717952 | KJ718617 | KJ718446 | KJ718271 | |
| Alternaria agerati | CBS 117221; E.G.S. 30.001; QM 9369 | R | Ageratum houstonianum | USA, Illinois | KJ718098 | KJ717953 | KJ718618 | KJ718447 | KJ718272 | |
| Alternaria agripestis | CBS 577.94; E.G.S. 41.034 | T | Euphorbia esula, stem lesion | Canada, Saskatchewan | KJ718099 | JQ646356 | KJ718619 | KJ718448 | KJ718273 | |
| Alternaria allii | Alternaria porri | CBS 107.28; E.G.S. 48.084 | T | Allium cepa, leaf spot | Puerto Rico | KJ718100 | KJ717954 | KJ718620 | KJ718449 | KJ718274 |
| Alternaria porri | CBS 109.41; CBS 114.38 | Allium cepa, seed | Denmark | KJ718101 | KJ717955 | KJ718621 | KJ718450 | KJ718275 | ||
| Alternaria porri | CBS 225.76 | Allium porrum, leaf | Italy | KJ718102 | KJ717956 | KJ718622 | KJ718451 | KJ718276 | ||
| CBS 116701; E.G.S. 33.134 | R | Allium cepa var. viviparum, floral bract | USA, Massachusetts | KJ718103 | KJ717957 | KJ718623 | KJ718452 | KJ718277 | ||
| Alternaria vanuatuensis | CBS 121345; E.G.S. 45.018 | (T) | Allium cepa, leaf | Vanuatu | KJ718104 | KJ717958 | KJ718624 | KJ718453 | KJ718278 | |
| Alternaria alternariacida sp. nov. | Alternaria solani | CBS 105.51; ATCC 11078; IMI 46816; CECT 2997 | T | Solanum lycopersicum, fruit | UK, England | KJ718105 | KJ717959 | KJ718625 | KJ718454 | KJ718279 |
| Alternaria anagallidis | CBS 107.44 | Anagallis arvensis, leaf spot | Denmark, Copenhagen | KJ718106 | JQ646338 | KJ718626 | EU130544 | KJ718280 | ||
| CBS 101004 | Anagallis arvensis, leaf spot | New Zealand, Auckland | KJ718107 | KJ717960 | KJ718627 | KJ718455 | KJ718281 | |||
| CBS 117128; E.G.S. 42.074 | R | Anagallis arvensis, leaf spot | New Zealand, Auckland | KJ718108 | KJ717961 | KJ718628 | KJ718456 | KJ718282 | ||
| CBS 117129; E.G.S. 50.091 | R | Anagallis arvensis, leaf spot | New Zealand, Auckland | KJ718109 | KJ717962 | KJ718629 | KJ718457 | KJ718283 | ||
| Alternaria anodae | PPRI 12376 | Anoda cristata, leaf | South Africa, Gauteng | KJ718110 | KJ717963 | KJ718630 | KJ718458 | KJ718284 | ||
| Alternaria aragakii | CBS 594.93; E.G.S. 29.016; QM 9046 | T | Passiflora edulis | USA, Hawaii | KJ718111 | KJ717964 | KJ718631 | KJ718459 | KJ718285 | |
| Alternaria argyroxiphii | CBS 117222; E.G.S. 35.122 | T | Argyroxiphium sp. | USA, Hawaii | KJ718112 | JQ646350 | KJ718632 | KJ718460 | KJ718286 | |
| PPRI 11848 | Ipomoea batatas, stem lesion | South Africa, Gauteng | KJ718113 | KJ717965 | KJ718633 | KJ718461 | KJ718287 | |||
| PPRI 11971 | Ipomoea batatas, leaf and stem lesion | South Africa, Mpumalanga | KJ718114 | KJ717966 | KJ718634 | KJ718462 | KJ718288 | |||
| Alternaria azadirachtae | CBS 116444; E.G.S. 46.195; BRIP 25386(ss1) | T | Azadirachta indica, leaf spot | Australia, Queensland | KJ718115 | KJ717967 | KJ718635 | KJ718463 | KJ718289 | |
| CBS 116445; E.G.S. 46.196; BRIP 25386(ss2) | R | Azadirachta indica, leaf spot | Australia, Queensland | KJ718116 | KJ717968 | KJ718636 | KJ718464 | KJ718290 | ||
| Alternaria bataticola | CBS 531.63; IFO 6187; MUCL 28916 | T | Ipomoea batatas | Japan | KJ718117 | JQ646349 | JQ646433 | KJ718465 | KJ718291 | |
| CBS 532.63 | Ipomoea batatas | Japan, Tokyo | KJ718118 | KJ717969 | KJ718637 | KJ718466 | KJ718292 | |||
| CBS 117095; E.G.S. 42.157; IMI 350492; BRIP 19470a | R | Ipomoea batatas, leaf spot | Australia, Queensland | KJ718119 | KJ717970 | KJ718638 | KJ718467 | KJ718293 | ||
| CBS 117096; E.G.S. 42.158; BRIP 19470b | R | Ipomoea batatas, leaf spot | Australia, Queensland | KJ718120 | KJ717971 | KJ718639 | KJ718468 | KJ718294 | ||
| PPRI 10502 | Ipomoea batatas, leaf and stem lesion | South Africa, Gauteng | KJ718121 | KJ717972 | KJ718640 | KJ718469 | KJ718295 | |||
| PPRI 11930 | Ipomoea batatas, leaf lesion | South Africa, Kwazulu-Natal | KJ718122 | KJ717973 | KJ718641 | KJ718470 | KJ718296 | |||
| PPRI 11931 | Ipomoea batatas, leaf lesion | South Africa, Kwazulu-Natal | KJ718123 | KJ717974 | KJ718642 | KJ718471 | KJ718297 | |||
| PPRI 11934 | Ipomoea batatas, leaf lesion | South Africa, Gauteng | KJ718124 | KJ717975 | KJ718643 | KJ718472 | KJ718298 | |||
| Alternaria blumeae | Alternaria brasiliensis | CBS 117215; E.G.S. 39.116 | (R) | Phaseolus vulgaris, leaf spot | Brazil, Esperito Santo | KJ718125 | KJ717976 | KJ718644 | KJ718473 | KJ718299 |
| CBS 117364; E.G.S. 40.149; ATCC 201357 | T | Blumea aurita | Thailand, Yala Province | KJ718126 | AY562405 | AY563291 | KJ718474 | KJ718300 | ||
| Alternaria calendulae | CBS 224.76; ATCC 38903; DSM 63161; IMI 205077 | T | Calendula officinalis, leaf spot | Germany | KJ718127 | KJ717977 | KJ718648 | KJ718475 | KJ718301 | |
| CBS 101498 | Calendula officinalis, leaf | New Zealand, Auckland | KJ718128 | KJ717978 | KJ718645 | KJ718476 | KJ718302 | |||
| Alternaria rosifolii | CBS 116439; E.G.S. 42.197 | (T) | Rosa sp., leaf spot | New Zealand, Auckland | KJ718129 | KJ717979 | KJ718646 | KJ718477 | KJ718303 | |
| CBS 116650; E.G.S. 30.142; QM 9561 | R | Calendula officinalis, leaf spot | Japan, Tokyo | KJ718130 | KJ717980 | KJ718647 | KJ718478 | KJ718304 | ||
| Alternaria carthami | CBS 635.80 | Carthamus tinctorius, leaf | Italy, Perugia | KJ718131 | KJ717981 | KJ718649 | KJ718479 | KJ718305 | ||
| Alternaria heliophytonis | CBS 116440; E.G.S. 43.143; IMI 366164 | (T) | Helianthus annuus, leaf | Canada, Saskatchewan | KJ718132 | KJ717982 | KJ718650 | KJ718480 | KJ718306 | |
| CBS 117091; E.G.S. 31.037 | R | Carthamus tinctorius, leaf spot | USA, Montana | KJ718133 | KJ717983 | KJ718651 | KJ718481 | KJ718307 | ||
| Alternaria carthamicola | Alternaria carthami | CBS 117092; E.G.S. 37.057; IMI 276943 | (R)T | Carthamus tinctorius | Iraq | KJ718134 | KJ717984 | KJ718652 | KJ718482 | KJ718308 |
| Alternaria cassiae | CBS 478.81; E.G.S. 33.147 | R | Senna obtusifolia, diseased seedling | USA, Mississippi | KJ718135 | KJ717985 | KJ718653 | KJ718483 | KJ718309 | |
| Alternaria sauropodis | CBS 116119; E.G.S. 47.112; IMI 286317; IMI 392448 | (T) | Sauropus androgynus | Malaysia, Sarawak | KJ718136 | KJ717986 | KJ718654 | KJ718484 | KJ718310 | |
| CBS 117224; E.G.S. 40.121 | R | Senna obtusifolia, leaf spot | Brazil, Federal District | KJ718137 | KJ717987 | KJ718655 | KJ718485 | KJ718311 | ||
| Alternaria hibiscinficiens | CBS 117369; E.G.S. 50.166 | (T) | Hibiscus sabdariffa, leaf | Fiji | KJ718138 | KJ717988 | KJ718656 | KJ718486 | KJ718312 | |
| Alternaria catananches sp. nov. | CBS 137456; PD 013/05703936 | T | Catananche caerulea | Netherlands | KJ718139 | KJ717989 | KJ718657 | KJ718487 | KJ718313 | |
| Alternaria centaureae | CBS 116446; E.G.S. 47.119 | T | Centaurea solstitialis, leaf spot | USA, California | KJ718140 | KJ717990 | KJ718658 | KJ718488 | KJ718314 | |
| Alternaria cichorii | CBS 102.33; E.G.S. 07.017; QM 1760 | T | Cichorium intybus, leaf spot | Cyprus | KJ718141 | KJ717991 | KJ718659 | KJ718489 | KJ718315 | |
| CBS 117218; E.G.S. 52.046; IMI 225641 | R | Cichorium endivia | Greece | KJ718142 | KJ717992 | KJ718660 | KJ718490 | KJ718316 | ||
| Alternaria cirsinoxia | CBS 113261; E.G.S. 41.136 | T | Cirsium arvense, stem lesion | Canada, Saskatchewan | KJ718143 | KJ717993 | KJ718661 | KJ718491 | KJ718317 | |
| Alternaria citrullicola sp. nov. | Alternaria cucumerina | CBS 103.32; VKM F-1881; Nattrass No. 190 | T | Citrullus vulgaris, fruit | Cyprus | KJ718144 | KJ717994 | KJ718662 | KJ718492 | KJ718318 |
| Alternaria conidiophora sp. nov. | CBS 137457 | T | – | Netherlands | KJ718145 | KJ717995 | KJ718663 | KJ718493 | – | |
| Alternaria crassa | CBS 103.18 | Datura sp., leaf spot | USA, Wisconsin | KJ718146 | KJ717996 | KJ718664 | KJ718494 | KJ718319 | ||
| CBS 110.38 | T | Datura stramonium, leaf spot | Cyprus | KJ718147 | KJ717997 | KJ718665 | KJ718495 | KJ718320 | ||
| Alternaria capsici | CBS 109160; E.G.S. 45.075; IMI 262408; IMI 381021 | (T) | Capsicum annuum | Australia | KJ718148 | AY562408 | AY563298 | KJ718496 | KJ718321 | |
| CBS 109162; E.G.S. 46.014 | Nicandra physalodes | USA, Indiana | KJ718149 | GQ180073 | GQ180089 | KJ718497 | KJ718322 | |||
| CBS 116647; E.G.S. 46.013 | R | Datura stramonium, leaf spot | USA, Indiana | KJ718150 | KJ717998 | KJ718666 | KJ718498 | KJ718323 | ||
| CBS 116648; E.G.S. 50.180 | R | Datura stramonium, leaf spot | New Zealand, Auckland | KJ718151 | KJ717999 | KJ718667 | KJ718499 | KJ718324 | ||
| CBS 122590; E.G.S. 44.071 | R | Datura stramonium, leaf spot | USA, Indiana | KJ718152 | GQ180072 | GQ180088 | KJ718500 | KJ718325 | ||
| Alternaria cucumerina | Alternaria loofahae | CBS 116114; E.G.S. 35.123 | (T) | Luffa acutangula | USA, Hawaii | KJ718153 | KJ718000 | KJ718668 | KJ718501 | KJ718326 |
| CBS 117225; E.G.S. 41.127 | R | Cucumis melo, leaf spot | USA, Indiana | KJ718154 | KJ718001 | KJ718669 | KJ718502 | KJ718327 | ||
| CBS 117226; E.G.S. 44.197; BRIP 23060 | R | Cucumis melo, leaf spot | Australia, Queensland | KJ718155 | KJ718002 | KJ718670 | KJ718503 | KJ718328 | ||
| Alternaria cyamopsidis | CBS 364.67; E.G.S. 17.065; QM 8575 | R | Cyamopsis tetragonoloba, leaf spot | USA, Maryland | KJ718156 | KJ718003 | KJ718671 | KJ718504 | KJ718329 | |
| CBS 117219; E.G.S. 13.120; QM 8000 | R | Cyamopsis tetragonoloba, leaf spot | USA, Georgia | KJ718157 | KJ718004 | KJ718672 | KJ718505 | KJ718330 | ||
| Alternaria dauci | CBS 111.38 | T | Daucus carota, seed | Italy | KJ718158 | KJ718005 | KJ718673 | KJ718506 | KJ718331 | |
| CBS 106.48 | Daucus carota, seed | – | KJ718159 | KJ718006 | KJ718674 | KJ718507 | KJ718332 | |||
| CBS 345.79; LEV 14814 | Daucus carota, leaf spot | New Zealand, Ohakune | KJ718160 | KJ718007 | KJ718675 | KJ718508 | KJ718333 | |||
| Alternaria cichorii | CBS 477.83; CBS 721.79; PD 79/954 | Cichorium intybus var. foliosum, leaf spot | Netherlands, Limburg | KJ718161 | KJ718008 | KJ718676 | KJ718509 | KJ718334 | ||
| CBS 101592 | Daucus carota, seed | Netherlands | KJ718162 | KJ718009 | KJ718677 | KJ718510 | KJ718335 | |||
| CBS 117097; E.G.S. 46.006 | R | Daucus carota, commercial seed | USA, California | KC584192 | KC584111 | KJ718678 | KC584651 | KC584392 | ||
| CBS 117098; E.G.S. 46.152 | R | Daucus carota, leaf spot | New Zealand | KJ718163 | KJ718010 | HE796726 | KJ718511 | KJ718336 | ||
| CBS 117099; E.G.S. 47.131 | R | Daucus carota, seed | USA, California | KJ718164 | KJ718011 | KJ718679 | KJ718512 | KJ718337 | ||
| Alternaria poonensis | CBS 117100; E.G.S. 47.138 | (R) | Coriandrum sativum, seedling | Puerto Rico | KJ718165 | JQ646348 | KJ718680 | KJ718513 | KJ718338 | |
| Alternaria deserticola sp. nov. | Alternaria acalyphicola | CBS 110799 | T | desert soil | Namibia | KJ718249 | KJ718077 | KJ718755 | KJ718595 | KJ718424 |
| Alternaria dichondrae | CBS 199.74; E.G.S. 38.007 | T | Dichondra repens, leaf spot | Italy | KJ718166 | JQ646357 | JQ646441 | KJ718514 | KJ718339 | |
| CBS 200.74; E.G.S. 38.008 | T | Dichondra repens, leaf spot | Italy | KJ718167 | KJ718012 | KJ718681 | KJ718515 | KJ718340 | ||
| CBS 346.79 | Dichondra repens, leaf spot | New Zealand | KJ718168 | KJ718013 | KJ718682 | KJ718516 | KJ718341 | |||
| CBS 117127; E.G.S. 40.057 | R | Dichondra sp., leaf | New Zealand, Auckland | KJ718169 | KJ718014 | KJ718683 | KJ718517 | KJ718342 | ||
| Alternaria echinaceae | CBS 116117; E.G.S. 46.081 | T | Echinacea sp., leaf lesion | New Zealand, Gisborne | KJ718170 | KJ718015 | KJ718684 | KJ718518 | KJ718343 | |
| CBS 116118; E.G.S. 46.082 | R | Echinacea sp., leaf lesion | New Zealand, Gisborne | KJ718171 | KJ718016 | KJ718685 | KJ718519 | KJ718344 | ||
| Alternaria grandis | CBS 109158; E.G.S. 44.106 | T | Solanum tuberosum, leaf spot | USA, Pennsylvania | KJ718239 | JQ646341 | JQ646425 | EU130547 | KJ718414 | |
| CBS 116695; E.G.S. 44.108 | R | Solanum tuberosum, leaf spot | USA, Pennsylvania | KJ718241 | KJ718070 | KJ718748 | KJ718587 | KJ718416 | ||
| Alternaria euphorbiicola | CBS 198.86; E.G.S. 38.082 | Euphorbia pulcherrima | USA, Florida | KJ718172 | KJ718017 | KJ718686 | KJ718520 | KJ718345 | ||
| CBS 119410; E.G.S. 41.029 | R | Euphorbia pulcherrima | USA, Hawaii | KJ718173 | KJ718018 | – | KJ718521 | KJ718346 | ||
| CBS 133874; E.G.S. 38.191 | Euphorbia hyssopifolia | USA, Louisiana | KJ718174 | KJ718019 | KJ718687 | KJ718522 | KJ718347 | |||
| Alternaria gypsophilae | CBS 107.41; E.G.S. 07.025; IMI 264349 | T | Gypsophila elegans, seed | Netherlands | KC584199 | KC584118 | KJ718688 | KC584660 | KC584401 | |
| Alternaria ipomoeae sp. nov. | Alternaria cucumerina | CBS 219.79 | T | Ipomoea batatas, stem and petiole | Ethiopia | KJ718175 | KJ718020 | KJ718689 | KJ718523 | KJ718348 |
| PPRI 8988 | Ipomoea batatas, stem | South Africa, Gauteng | KJ718176 | KJ718021 | KJ718690 | KJ718524 | KJ718349 | |||
| Alternaria jesenskae | CBS 133855; CCM 8361 | T | Fumana procumbens, seed | Slovakia | KJ718177 | KJ718022 | KJ718691 | KJ718525 | KJ718350 | |
| Alternaria limicola | CBS 483.90; E.G.S. 39.070 | T | Citrus aurantiifolia, leaf spot | Mexico, Colima | KJ718178 | JQ646329 | JQ646413 | KJ718526 | KJ718351 | |
| CBS 117360; E.G.S. 43.009 | R | Citrus sp. | Mexico, Jalisco | KJ718179 | KJ718023 | – | KJ718527 | KJ718352 | ||
| Alternaria linariae | CBS 105.41; E.G.S. 07.016 | T | Linaria maroccana, seedling | Denmark | KJ718180 | KJ718024 | KJ718692 | KJ718528 | KJ718353 | |
| Alternaria solani | CBS 108.53 | – | – | KJ718181 | KJ718025 | KJ718693 | KJ718529 | KJ718354 | ||
| Alternaria solani | CBS 107.61 | – | Belgium | KJ718182 | KJ718026 | KJ718694 | KJ718530 | KJ718355 | ||
| Alternaria tomatophila | CBS 109156; E.G.S. 42.156 | (T) | Solanum lycopersicum, leaf spot | USA, Indiana | KJ718183 | JQ646347 | GQ180101 | KJ718531 | KJ718356 | |
| Alternaria subcylindrica | CBS 109161; E.G.S. 45.113 | (T) | Solanum lycopersicum var. cerasiforme, leaf spot | USA, Louisiana | KJ718184 | JQ646345 | JQ646429 | KJ718532 | KJ718357 | |
| Alternaria cretica | CBS 109164; E.G.S. 46.188 | (T) | Solanum lycopersicum, leaf spot | Greece, Crete | KJ718185 | JQ646342 | JQ646426 | EU130545 | KJ718358 | |
| Alternaria cucumericola | CBS 116438; E.G.S. 41.057 | (T) | Cucumis sativus, leaf spot | New Zealand | KJ718186 | KJ718027 | KJ718695 | KJ718533 | KJ718359 | |
| Alternaria tabasco | CBS 116441; E.G.S. 45.108 | (T) | Capsicum frutescens, leaf spot | USA, Louisiana | KJ718187 | KJ718028 | KJ718696 | KJ718534 | KJ718360 | |
| Alternaria tomatophila | CBS 116704; E.G.S. 44.074 | (R) | Solanum lycopersicum, leaf spot | USA, Indiana | KJ718188 | KJ718029 | KJ718697 | KJ718535 | KJ718361 | |
| CPC 21620 | Solanum lycopersicum, leaf spot | Thailand, Chiang Mai | KJ718189 | KJ718030 | KJ718698 | KJ718536 | KJ718362 | |||
| Alternaria macrospora | Alternaria porri | CBS 106.29 | Gossypium sp. | Nigeria | KJ718193 | KJ718032 | KJ718701 | KJ718540 | KJ718366 | |
| CBS 117228; E.G.S. 50.190; ATCC 58172 | T | Gossypium barbadense | USA, Arizona | KC584204 | KC584124 | KJ718702 | KC584668 | KC584410 | ||
| Alternaria montanica | CBS 121343; E.G.S. 44.112; IMI 257563 | T | Cirsium arvense | USA, Montana | KJ718194 | KJ718033 | KJ718703 | KJ718541 | KJ718367 | |
| Alternaria multirostrata | CBS 712.68; ATCC 18515; IMI 135454; MUCL 11722; QM 8820; VKM F-2997 | T | Richardia scabra, floral bract | USA, Georgia | KJ718195 | JQ646362 | KJ718704 | EU130546 | KJ718368 | |
| CBS 713.68; ATCC 18517; IMI 135455; MUCL 11715; QM 8821 | R | Richardia scabra, floral bract | USA, Georgia | KJ718196 | KJ718034 | KJ718705 | KJ718542 | KJ718369 | ||
| Alternaria neoipomoeae sp. nov. | PPRI 8990 | Ipomoea batatas | South Africa, North West | KJ718197 | KJ718035 | KJ718706 | KJ718543 | KJ718370 | ||
| PPRI 11845 | T | Ipomoea batatas, stem | South Africa, Gauteng | KJ718198 | KJ718036 | KJ718707 | KJ718544 | KJ718371 | ||
| PPRI 11847 | Ipomoea batatas | South Africa, Mpumalanga | KJ718199 | KJ718037 | KJ718708 | KJ718545 | KJ718372 | |||
| PPRI 13903 | Ipomoea batatas, leaf lesion | South Africa, Gauteng | KJ718200 | KJ718038 | KJ718709 | KJ718546 | KJ718373 | |||
| Alternaria nitrimali | CBS 109163; E.G.S. 46.151 | T | Solanum viarum, leaf spot | Puerto Rico | KJ718201 | JQ646358 | KJ718710 | KJ718547 | KJ718374 | |
| Alternaria novae-guineensis | CBS 116120; E.G.S. 47.198 | T | Citrus sp., dry leaf | Papua New Guinea | KJ718202 | KJ718039 | KJ718711 | KJ718548 | KJ718375 | |
| PPRI 12171 | Galinsoga parviflora, leaf | South Africa, Gauteng | KJ718203 | KJ718040 | KJ718712 | KJ718549 | KJ718376 | |||
| Alternaria obtecta | CBS 117367; E.G.S. 42.063 | R | Euphorbia pulcherrima, leaf | USA, California | KJ718204 | KJ718041 | KJ718713 | KJ718550 | KJ718377 | |
| CBS 134278; E.G.S. 42.064 | Euphorbia pulcherrima | USA, California | KJ718205 | KJ718042 | KJ718714 | KJ718551 | KJ718378 | |||
| Alternaria paralinicola sp. nov. | Alternaria linicola | CBS 116652; E.G.S. 47.157; DAOM 225747 | (R)T | Linum usitatissimum, seed | Canada, Manitoba | KJ718206 | KJ718043 | KJ718715 | KJ718552 | KJ718379 |
| Alternaria passiflorae | CBS 113.38 | Passiflora edulis | Australia, South Queensland | KJ718207 | JQ646353 | JQ646437 | KJ718553 | KJ718380 | ||
| Alternaria solani | CBS 166.77 | Capsicum frutescens, leaf | New Zealand, Waitakere | KJ718208 | KJ718044 | KJ718716 | KJ718554 | KJ718381 | ||
| CBS 629.93; E.G.S. 16.150; QM 8458 | R | Passiflora edulis, fruit | New Zealand | KJ718209 | KJ718045 | KJ718717 | KJ718555 | KJ718382 | ||
| Alternaria hawaiiensis | CBS 630.93; E.G.S. 29.020; QM 9050 | (T) | Passiflora edulis | USA, Hawaii | KJ718210 | JQ646352 | KJ718718 | KJ718556 | KJ718383 | |
| Alternaria gaurae | CBS 116333; E.G.S. 50.121 | (T) | Gaura lindheimeri, leaf | New Zealand, Auckland | KJ718211 | KJ718046 | KJ718719 | KJ718557 | KJ718384 | |
| CBS 117102; E.G.S. 51.165 | R | Passiflora ligularis, fruit spot | New Zealand, Auckland | KJ718212 | KJ718047 | KJ718720 | KJ718558 | KJ718385 | ||
| CBS 117103; E.G.S. 52.032 | R | Passiflora caerulea, leaf spot | New Zealand, Auckland | KJ718213 | KJ718048 | KJ718721 | KJ718559 | KJ718386 | ||
| Alternaria pipionipisi | CBS 116115; E.G.S. 40.096; IMI 340950 | T | Cajanus cajan, seed | India | KJ718214 | KJ718049 | KJ718722 | KJ718560 | KJ718387 | |
| Alternaria obtecta | CBS 117365; E.G.S. 42.048 | (R) | Euphorbia pulcherrima, leaf | USA, California | KJ718215 | KJ718050 | KJ718723 | KJ718561 | KJ718388 | |
| Alternaria obtecta | CBS 134265; E.G.S. 42.047 | Euphorbia pulcherrima | USA, California | KJ718216 | KJ718051 | KJ718724 | KJ718562 | KJ718389 | ||
| Alternaria porri | Alternaria allii | CBS 116649; E.G.S. 17.082; QM 8613 | (R) | Allium cepa, leaf | USA, Nebraska | KJ718217 | KJ718052 | KJ718725 | KJ718563 | KJ718390 |
| CBS 116698; E.G.S. 48.147 | R | Allium cepa, leaf spot | USA, New York | DQ323700 | KC584132 | KJ718726 | KC584679 | KC584421 | ||
| CBS 116699; E.G.S. 48.152 | R,T | Allium cepa, leaf spot | USA, New York | KJ718218 | KJ718053 | KJ718727 | KJ718564 | KJ718391 | ||
| Alternaria protenta | Alternaria solani | CBS 347.79; E.G.S. 44.091; LEV 14726; ATCC 38569 | Solanum lycopersicum, fruit rot | New Zealand, Levin | KJ718219 | KJ718054 | KJ718728 | KJ718565 | KJ718392 | |
| Alternaria hordeiseminis | CBS 116437; E.G.S. 32.076 | (T) | Hordeum vulgare, seed | New Zealand | KJ718220 | KJ718055 | KJ718729 | KJ718566 | KJ718393 | |
| Alternaria solani | CBS 116651; E.G.S. 45.020 | (R) | Solanum tuberosum, tuber | USA, California | KC584217 | KC584139 | GQ180097 | KC584688 | KC584430 | |
| CBS 116696; E.G.S. 45.023; IMI 372955 | R | Helianthus annuus, leaf spot | Israel | KJ718221 | JQ646335 | JQ646419 | KJ718567 | KJ718394 | ||
| CBS 116697; E.G.S. 45.024; IMI 372957 | R | Helianthus annuus, leaf spot | Israel | KJ718222 | KJ718056 | KJ718730 | KJ718568 | KJ718395 | ||
| Alternaria pulcherrimae | CBS 121342; E.G.S. 42.122; IMI 310506 | (R) | Euphorbia pulcherrima | Australia, Queensland | KJ718223 | KJ718057 | KJ718731 | KJ718569 | KJ718396 | |
| Alternaria solani | CBS 135189; E.G.S. 45.053 | (R) | Solanum tuberosum | New Zealand, Hastings | KJ718224 | GQ180082 | GQ180098 | KJ718570 | KJ718397 | |
| Alternaria pseudorostrata | CBS 119411; E.G.S. 42.060 | T | Euphorbia pulcherrima | USA, California | JN383483 | AY562406 | AY563295 | KC584680 | KC584422 | |
| Alternaria ranunculi | CBS 116330; E.G.S. 38.039; IMI 285697 | T | Ranunculus asiaticus, seed | Israel | KJ718225 | KJ718058 | KJ718732 | KJ718571 | KJ718398 | |
| Alternaria ricini | CBS 215.31 | T | Ricinus communis | Japan | KJ718226 | KJ718059 | KJ718733 | KJ718572 | KJ718399 | |
| CBS 353.86 | Ricinus communis | Italy, Sardinia | KJ718227 | JQ646331 | KJ718734 | KJ718573 | KJ718400 | |||
| CBS 117361; E.G.S. 06.181 | R | Ricinus communis | USA, Virginia | KJ718228 | KJ718060 | KJ718735 | KJ718574 | KJ718401 | ||
| Alternaria rostellata | CBS 117366; E.G.S. 42.061 | T | Euphorbia pulcherrima, leaf | USA, California | KJ718229 | JQ646332 | KJ718736 | KJ718575 | KJ718402 | |
| Alternaria scorzonerae | Alternaria linicola | CBS 103.46; Elliot No. 45-190C | Linum usitatissimum | UK, Scotland | KJ718190 | JQ646363 | JQ646447 | KJ718537 | KJ718363 | |
| CBS 478.83; E.G.S. 38.011 | R,T | Scorzonera hispanica, leaf spot | Netherlands, Reusel | KJ718191 | JQ646334 | KJ718699 | KJ718538 | KJ718364 | ||
| Alternaria linicola | CBS 116703; E.G.S. 36.110; IMI 274549 | (R) | Linum usitatissimum, seed | UK, Derbyshire | KJ718192 | KJ718031 | KJ718700 | KJ718539 | KJ718365 | |
| Alternaria sennae sp. nov. | Alternaria cassiae | CBS 477.81; E.G.S. 34.030; IMI 257253 | (R)T | Senna corymbosa, leaf | India, Uttar Pradesh | KJ718230 | JQ646344 | JQ646428 | EU130543 | KJ718403 |
| Alternaria sesami | CBS 240.73 | Sesamum indicum | Egypt | KJ718231 | JQ646343 | KJ718737 | KJ718576 | KJ718404 | ||
| CBS 115264; CBS 117214; E.G.S. 13.027 | R | Sesamum indicum, seedling | India | JF780939 | KJ718061 | KJ718738 | KJ718577 | KJ718405 | ||
| Alternaria sidae | CBS 117730; E.G.S. 12.129 | T | Sida fallax, leaf spot | Kiribati, Phoenix Islands | KJ718232 | KJ718062 | KJ718739 | KJ718578 | KJ718406 | |
| Alternaria silybi | CBS 134092; VKM F-4109 | T | Silybum marianum, leaf | Russia, Vladivistok | KJ718233 | KJ718063 | KJ718740 | KJ718579 | KJ718407 | |
| CBS 134093; VKM F-4117 | Silybum marianum, leaf | Russia, Vladivistok | KJ718234 | KJ718064 | KJ718741 | KJ718580 | KJ718408 | |||
| CBS 134094; VKM F-4118 | Silybum marianum, leaf | Russia, Vladivistok | KJ718235 | KJ718065 | KJ718742 | KJ718581 | KJ718409 | |||
| Alternaria solani | CBS 106.21 | – | – | KJ718236 | KJ718066 | KJ718743 | KJ718582 | KJ718410 | ||
| CBS 111.41 | Solanum aviculare, leaf spot | – | KJ718237 | KJ718067 | KJ718744 | KJ718583 | KJ718411 | |||
| Alternaria danida | CBS 111.44; E.G.S. 07.029; QM 1772 | (T) | Ageratum houstonianum, seed | Italy | Y17070 | KJ718068 | KJ718745 | KJ718584 | KJ718412 | |
| CBS 109157; E.G.S. 44.098 | R | Solanum tuberosum, leaf spot | USA, Washington | KJ718238 | GQ180080 | KJ718746 | KJ718585 | KJ718413 | ||
| Alternaria viciae-fabae | CBS 116442; E.G.S. 46.162; ICMP 10242 | (T) | Vicia faba | New Zealand | KJ718240 | KJ718069 | KJ718747 | KJ718586 | KJ718415 | |
| Alternaria solani-nigri | Alternaria cyphomandrae | CBS 109155; E.G.S. 40.058 | (T) | Cyphomandra betacea, fruit | New Zealand, New Plymouth | KJ718242 | JQ646360 | JQ646444 | KJ718588 | KJ718417 |
| CBS 113403; E.G.S. 51.106; CPC 10620 | R | Solanum nigrum, leaf spot | New Zealand, Waikato | KJ718243 | KJ718071 | KJ718749 | KJ718589 | KJ718418 | ||
| Alternaria herbiculinae | CBS 116332; E.G.S. 49.180 | (T) | Petroselinum crispum, stunted plant | New Zealand, Taranaki | KJ718244 | KJ718072 | KJ718750 | KJ718590 | KJ718419 | |
| Alternaria glyceriae | CBS 116334; E.G.S. 51.107 | (T) | Glyceria maxima, leaf spot | New Zealand, Waikato | KJ718245 | KJ718073 | KJ718751 | KJ718591 | KJ718420 | |
| Alternaria beticola | CBS 116447; E.G.S. 47.196 | (T) | Beta vulgaris, leaf spot | New Zealand, Canterbury | KJ718246 | KJ718074 | KJ718752 | KJ718592 | KJ718421 | |
| CBS 117101; E.G.S. 51.032 | R | Solanum nigrum, leaf spot | New Zealand, Waikato | KJ718247 | KJ718075 | KJ718753 | KJ718593 | KJ718422 | ||
| Alternaria ascaloniae | CBS 121347; E.G.S. 46.052 | (T) | Allium ascalonicum, leaf spot | New Zealand, Hastings | KJ718248 | KJ718076 | KJ718754 | KJ718594 | KJ718423 | |
| Alternaria steviae | CBS 631.88; IFO 31212 | Stevia rebaudiana, leaf spot | Japan, Kagawa | KJ718250 | KJ718078 | KJ718756 | KJ718596 | KJ718425 | ||
| CBS 632.88; IFO 31183 | Stevia rebaudiana, leaf spot | Japan, Kagawa | KJ718251 | JQ646339 | KJ718757 | KJ718597 | KJ718426 | |||
| CBS 117362; E.G.S. 37.019; IFO 31182 | T | Stevia rebaudiana, leaf spot | Japan, Kagawa | KJ718252 | KJ718079 | KJ718758 | KJ718598 | KJ718427 | ||
| Alternaria tagetica | CBS 297.79; GST AM2 | Tagetes sp., seed | UK | KJ718253 | KJ718080 | KJ718759 | KJ718599 | KJ718428 | ||
| CBS 298.79; GST AM3 | Tagetes sp., seed | UK | KJ718254 | KJ718081 | KJ718760 | KJ718600 | KJ718429 | |||
| CBS 479.81; E.G.S. 33.081; GST 556 | R | Tagetes erecta, seed | UK, England | KC584221 | KC584143 | KJ718761 | KC584692 | KC584434 | ||
| CBS 480.81; E.G.S. 33.184 | R | Tagetes sp., seed | USA, South Carolina | KJ718255 | KJ718082 | KJ718762 | KJ718601 | KJ718430 | ||
| CBS 117217; E.G.S. 44.045 | R | Tagetes sp., leaf spot | USA, Ohio | KJ718256 | KJ718083 | KJ718763 | KJ718602 | KJ718431 | ||
| Alternaria thunbergiae | CBS 116331; E.G.S. 41.073; BRIP 14963 | T | Thunbergia alata, leaf spot | Australia, Queensland | KJ718257 | KJ718084 | KJ718764 | KJ718603 | KJ718432 | |
| Alternaria iranica | CBS 120986; E.G.S. 51.075 | (T) | Allium cepa, leaf | Iran, Miandoab | KJ718258 | KJ718085 | KJ718765 | KJ718604 | KJ718433 | |
| CBS 122597 | Thunbergia alata | New Zealand, Auckland | KJ718259 | KJ718086 | KJ718766 | KJ718605 | KJ718434 | |||
| Alternaria tillandsiae | CBS 116116; E.G.S. 43.074 | T | Tillandsia usneoides | New Zealand | KJ718260 | KJ718087 | KJ718767 | KJ718606 | KJ718435 | |
| Alternaria tropica | CBS 631.93; E.G.S. 39.126 | T | Passiflora edulis, fruit | USA, Florida | KJ718261 | KJ718088 | KJ718768 | KJ718607 | KJ718436 | |
| CBS 117216; E.G.S. 39.125 | R | Passiflora edulis, fruit | USA, Florida | KJ718262 | KJ718089 | KJ718769 | KJ718608 | KJ718437 | ||
| Alternaria venezuelensis | CBS 116121; E.G.S. 48.065 | T | Phaseolus vulgaris, leaf spot | Venezuela, Maracay | KJ718263 | KJ718090 | KJ718770 | KJ718609 | KJ718438 | |
| Alternaria zinniae | CBS 118.44 | Callistephus chinensis, seed | Hungary | KJ718264 | JQ646361 | KJ718771 | KJ718610 | KJ718439 | ||
| CBS 107.48 | Zinnia sp., leaf | Netherlands | KJ718265 | KJ718091 | KJ718772 | KJ718611 | KJ718440 | |||
| CBS 117.59 | Zinnia elegans | Italy, Sardinia | KJ718266 | KJ718092 | KJ718773 | KJ718612 | KJ718441 | |||
| CBS 108.61 | Zinnia elegans | – | KJ718267 | KJ718093 | KJ718774 | KJ718613 | KJ718442 | |||
| CBS 299.79 | Zinnia sp., seed | UK | KJ718268 | KJ718094 | KJ718775 | KJ718614 | KJ718443 | |||
| CBS 300.79 | Zinnia sp., seed | UK | KJ718269 | KJ718095 | KJ718776 | KJ718615 | KJ718444 | |||
| CBS 117223; E.G.S. 44.035 | R | Zinnia elegans, leaf spot | New Zealand, Auckland | KJ718270 | KJ718096 | KJ718777 | KJ718616 | KJ718445 | ||
1
ATCC: American Type Culture Collection, Manassas, VA, USA; BRIP: Queensland Plant Pathology Herbarium, Queensland, Australia; CBS: Culture collection of the Centraalbureau voor Schimmelcultures, Fungal Biodiversity Centre, Utrecht, Netherlands; CCM: Czech Collection of Microorganisms, Brno, Czech Republic; CECT: Spanish Type Culture Collection, Valencia, Spain; CPC: Personal collection of P.W. Crous, Utrecht, Netherlands; DAOM: Canadian Collection of Fungal Cultures, Ottawa, Canada; DSM: German Collection of Microorganisms and Cell Cultures, Leibniz Institute, Braunschweig, Germany; E.G.S.: Personal collection of Dr. E.G. Simmons; Elliott: Personal collection of M.E. Elliott; GST: Personal collection of G.S. Taylor; ICMP: International Collection of Micro-organisms from Plants, Auckland, New Zealand; IFO: Institute for Fermentation Culture Collection, Osaka, Japan; IMI: Culture collection of CABI Europe UK Centre, Egham UK; LEV: Plant Health and Diagnostic Station, Levin, New Zealand; MUCL: (Agro)Industrial Fungi and Yeast Collection of the Belgian Co-ordinated Collections of Micro-organisms (BCCM), Louvain-la Neuve, Belgium; Nattrass: Personal collection of R.M. Nattrass; PD: Plant Protection Service, Wageningen, Netherlands; PPRI: ARC-Plant Protection Research Institute, Roodeplaat, South Africa; QM: Quarter Master Culture Collection, Amherst, MA, USA; VKM: All-Russian Collection of Microorganisms, Moscow, Russia.
2
T: ex-type strain; R: representative strain; Letters between parentheses refer to synonymised species names; Bold letters are designated in this study.