Table 1.
Pos. | Amino acid | Function | Effect of amino acid substitution |
---|---|---|---|
N-TERM | |||
1 | Met (M) | ||
2 | Ala (A) | ||
3 | Pro (P) | Neuro-protection | Pro3 to Ala (P3A) – abrogates neuro-protective function |
4 | Arg (R) | ||
HYDROPHOBIC CORE REGION | |||
5 | Gly (G) | ||
6 | Phe (F) | IGFBP-3 binding, Aβ binding | Phe6 to Ala (F6A) – abrogates IGFBP-3 binding |
7 | Ser (S) | Aβ protection | Ser7 to Ala (S7A) – abrogates cyto-protective and neuro-protective functions, and prevents dimerization |
Aβ binding | |||
Dimerization | |||
8 | Cys (C) | Neuro-protection | Cys8 to Ala (C8A) – abrogates neuro-protective function |
BAX, BAD, and tBID binding | |||
9 | Leu (L) | Neuro-protection | Leu9 to Arg (L9R) – Non-secretory, but retains function when added into the medium |
Secretion | |||
Dimerization | Leu9 Ala (L9A) – prevents dimerization and abrogates neuro-protective function | ||
10 | Leu (L) | Secretion | Leu10 to Asp (L10D) – abrogates secretion |
Leu10 to Arg (L10R) – abrogates secretion | |||
11 | Leu (L) | Secretion | Leu11 to Arg (L11R) – abrogates secretion |
12 | Leu (L) | Neuro-protection | Leu12 to Ala (L12A) – abrogates neuro-protective function |
13 | Thr (T) | Neuro-protection | Thr13 to Ala (T13A) – abrogates neuro-protective function |
14 | Ser (S) | Neuro-protection | Ser14 to Gly (S14G) increases cyto-protective potency over 1,000-fold. This isoform is active when monomeric |
Ser14 to D-Ser increases potency | |||
Ser14 to Ala (S14A) – abrogates neuro-protective function | |||
15 | Glu (E) | ||
16 | Ile (I) | ||
17 | Asp (D) | ||
18 | Leu (L) | ||
C-TERM | |||
19 | Pro (P) | Aβ protection | Pro19 to Ala (P19A) – abrogates neuro-protective function |
Secretion | Pro19 to Arg (P19R) – abrogates secretion | ||
20 | Val (V) | Secretion | Val20 to Arg (V20A) – abrogates secretion |
21 | Lys (K) | IGFBP-3 binding | Lys21 to Ala (L21A) – blocks interaction at lower IGFBP-3 concentrations |
22 | Arg (R) | ?Non-essential | |
23 | Arg (R) | ?Non-essential | |
24 | Ala (A) | ?Non-essential |
Bolded: neuro-protective core domain (NPCD).