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. 2014 Nov 28;12(Suppl 2):S2. doi: 10.1186/1479-5876-12-S2-S2

Table 1.

Data sources used to explore the different biomedical dimensions of the project and for validation purposes.

Data-sets Data-types Reference Brief Description.
BioBridge Metabolomics, Proteomics, Transcriptomics, Physiological and Clinical Measurements [27], [83], [84], COPD patients with low and normal fat free mass index and healthy subjects studied before and after training.

PAC-COPD Clinical Measurements and Co-morbidity data. [75] COPD patients studied after the first hospitalization because of an episode of exacerbation.

Medicare ICD9 codes from hospital registries. [85], [85] Health Insurance Program

Animal experiments Muscle Transcriptomics and muscle & blood Cytokines. Role of eiF6 in energy metabolism Synergy-COPD-FP7-ICT-270086:2010-13. Guinea Pig and mice models, C2C12 cell culture. Normoxic and hypoxic conditions

Public datasets SNOMED-CT, MeSH, angiogenesis-related expression data, etc. See Table 1 in COPDKB [35] Public resources integrated into the Synergy-COPD Knowledge Base.