Table 2. An analysis of the percent of time that each DNA Polymerase simulation spent in the closed, intermediate, and open conformations.
No. | Initial Conformation | Percent Closed (%) | Percent Intermediate (%) | Percent Open (%) | Simulation Time (µs) |
1 | Open | 0% | 0% | 100% | 0.5 |
2 | Ajar | 0% | 0.2% | 99.8% | 1.0 |
3 | Closed | 22.5% | 6.5% | 71.0% | 1.0 |
4 | Open | 0% | 0% | 100% | 0.5 |
5 | Ajar | 0% | 0.4% | 99.6% | 1.0 |
6 | Closed | 75.7% | 3.4% | 20.9% | 1.0 |
7 | Open | 0% | 0% | 100% | 0.5 |
8 | Ajar | 0% | 4.4% | 95.6% | 1.0 |
9 | Closed | 34.8% | 28.9% | 36.3% | 3.0 |
Refer to Table 1 for more information about each simulation.