Table 3.

Replication study results for the 10 CpG site – SNP correlations meeting an FDR<0.05

CpG site coordinatea	Assay	Location	SNPb	Rho	p-value
Chr8:128393157	ADS2771-FS2re	Intergenic	rs16902094	−0.46	8.5×10−16
Chr8:128167809	ADS2774-FS2	PRNCR1	rs1456315	0.34	6.4×10−9
Chr8:128167809	ADS2774-FS2	PRNCR1	rs2466032	−0.15	0.02
Chr8:128167809	ADS2774-FS2	PRNCR1	rs13254738	0.29	1.5×10−6
Chr8:128498051	ADS3549-FS1	POU5F1B	rs6983267	0.36	1.8×10−9
Chr8:128498051	ADS3549-FS1	POU5F1B	rs10505477	0.38	2.0×10−10
Chr8:128498051	ADS3549-FS1	POU5F1B	rs7014346	−0.41	2.0×10−12
Chr8:128498051	ADS3549-FS1	POU5F1B	rs7837328	−0.39	3.9×10−11
Chr8:128498134	ADS3549-FS3	POU5F1B	rs7837328	−0.21	4.5×10−4
Chr8:128498134	ADS3549-FS3	POU5F1B	rs7014346	−0.25	3.6×10−5

Abbreviations: FDR, False Discovery Rate; SNP, single nucleotide polymorphism

^aNCBI36/hg18 coordinate

^bCancer susceptibility SNP at 8q24