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. 2014 Dec 4;8(12):e3372. doi: 10.1371/journal.pntd.0003372

Table 1. RNAseq metadata from T. infestans sialotranscriptomes following trimming of low quality (<10) ends and rejection of average quality <20.

Library name * Strains used ** Total number of sequences Total number of residues Average length Median size SRA accession
Arg-A 30 38,060,109 10,385,270,028 272.9 300 SRR1168894
Arg-N 30 39,759,543 11,417,825,638 287.2 300 SRR1168938
BolCol-A 21,28,37,40,43,47 38,418,718 10,546,661,014 274.5 300 SRR1168892
BolCol-N 21,28,37,40,43,47 39,223,445 11,258,595,763 287 300 SRR1168893
BolNat-A 24, 50, 54, 56 38,573,948 10,165,647,571 263.5 300 SRR1168890
BolNat-N 24, 50, 54, 56 48,570,803 13,994,680,783 288.1 300 SRR1168891
Chile-A 6 34,269,672 9,102,400,847 265.6 300 SRR1168882
Chile-N 6 38,866,808 11,069,693,781 284.8 300 SRR1168885
Peru-A 4, 5 38,540,450 9,775,095,017 253.6 300 SRR1168888
Peru-N 4, 5 41,292,975 11,889,399,223 287.9 300 SRR1168889
Total 395,576,471 109,605,269,665

*Arg = Argentina. BolCol = Bolivian colony. BolNat = Bolivian F1 strain. The suffix –A stands for adult, -N for nymphal libraries.

**See supplemental table S1 for description of strains.