TABLE 1.
Product | Primer name | Primer sequencea |
---|---|---|
ecpA–D | ecpAHindIII | CCCAAGCTTGTCCTCAATTCAACTCGG |
ecpDHindIII | CCCAAGCTTGCCGACCGAAATCGCCTG | |
ecpA–E | EcpAXbaI | GGACATCACGTCCTCTAGACAACTCGGG |
EcpEHindIII | TCTGAGGTGGAAAGCTTCCCTCGA | |
ecpR promoter | 0324.5.XbaI | GGTCTAGACTTTAATTATGACTC |
0324.3.XbaI | GGTCTAGATACTTTCCAAACCTG | |
5′-flanking region of ecpA for deletions | 0323.SalI.5F | GGAGAGTCGACGAAAAGATTTCGTGTTTATC |
0323.NotI.5R | CCGTTCCAAGCGGCCGCAAGAGCGTGTATTTCTTCCCGAGTTGAATTG | |
3′-flanking region of ecpA | 0323.NotI.3F | CGCTCTTGCGGCCGCTTGGAACGGTCTCTCTGATGTACCAGCAGGG |
deletions | 0323.PstI.3R | GGTGCCTGCAGGGTACTGAAAGTGGTAGTTTG |
3′-flanking region of ecpD for deletions | 0320.Not1.3F | CGCTCTTGCGGCCGCTTGGAACGG TAAGGCCCTGCTGACAGCGGTCTG |
0320.PstI.3R | TTAATCTGCAGCTTAAACCACGTGTTGCCGGTG | |
ΔecpA.NotI linker | 0323.SalI.5F | For splice overlap extension PCR of products ecpA.5.Not and ecpA.3.Not PCR products |
0323.PstI.3R | ||
ΔecpA–D.NotI linker | 0323.SalI.5F | For splice overlap extension PCR of products ecpA.5.Not and ecpD.3.Not PCR products |
0320.PstI.3R |
a Restriction enzyme sequences are underlined.