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. 2014 Dec 5;9(12):e114551. doi: 10.1371/journal.pone.0114551

Table 2. Similarity, identity, and coverage of select hydrogenase proteins comparing the Rubrivivax gelatinosus CBS sensor and uptake hydrogenases to other bacterial species including Ralstonia eutropha H16.

Similarity% Identity% Coverage%
Sensor Hydrogenase
HupU Rx. gelatinosus IL144 99 98 100
R. eutropha H16 (HoxB) 84 74 98
HupV Rx. gelatinosus IL144 99 98 100
R. eutropha H16 (HoxC) 75 66 100
Uptake Hydrogenase
HupA Rx. gelatinosus IL144 100 100 100
R. eutropha H16 (HoxK) 96 89 87
HupB Rx. gelatinosus IL144 99 99 100
R. eutropha H16 (HoxG) 92 86 100

HupUV is a sensor hydrogenase, with HupU being the small subunit and HupV being the large, catalytic subunit. HupAB comprises a membrane-bound uptake hydrogenase with a small HupA subunit and a large, catalytic HupB subunit. Analysis was done using a NCBI P-BLAST search.