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. 2014 Dec 8;4:7365. doi: 10.1038/srep07365

Figure 3. Phylogenetic analysis of HAdV-7d strain DG01_2011 isolated from Dongguan, Southern China (2011).

Figure 3

Nucleotide sequences of the archived HAdV-7 hexon genes (A) and whole genomes (B) are accessible from GenBank. These include five hexon gene sequences from Taiwan (TW; JX174426-JX174430); three from Hebei (JQ360620-JQ360622); one from Chongqing (JX625134); one from Shaanxi Province (JF800905); and one, this report, from Dongguan (DG) (KC440171). Additional HAdV-7 sequences from other global isolates were also analyzed. For reference, taxon names include the corresponding GenBank accession number, country of isolation, strain name, year of isolation (if available), and genome type (if available). Boot-strapped, neighbor-joining trees with 1,000 replicates were constructed using the MEGA 5.1.0 software (http://www.megasoftware.net) and by applying default parameters, with a maximum-composite-likelihood method. Bootstrap numbers shown at the nodes indicate the percentages of 1,000 replications producing the clade. A bootstrap value of 80 indicates robustness and confidence in the branching. The scale bar indicates units of nucleotide substitutions per site. Sequences from strains DG01_2011, 0901HZ/ShX/2009, and CQ1198_2010 are noted for reference (▴).