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. 2014 Sep 26;15(1):319. doi: 10.1186/1471-2105-15-319

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© Pierce et al.; licensee BioMed Central Ltd. 2014

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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The structures and starting position of the docking test cases. Bound structures of (A) 3HUJ, (B) 4EI5, (C) 4L4T, (D) 4LHU, (E) 4MNG, as well as a representative docking start position (F) are shown (test case 3HUJ), with TCRs colored blue (α chain) and gold (β chain), CD1 and MR1 green, and antigens magenta. Not shown are TCR constant domains, as well as the α3 domain and β2m of CD1d and MR1.