Table 7.
SNP summary for samples from pediatric participants of the eMERGE network.
| Chromosome | Imputation output | Filter at info score 0.7 |
|---|---|---|
| 1 | 2992265 | 1323149 |
| 2 | 3292686 | 1363591 |
| 3 | 2751022 | 1234814 |
| 4 | 2725555 | 1264290 |
| 5 | 2519464 | 1158692 |
| 6 | 2414294 | 1157434 |
| 7 | 2205622 | 990787 |
| 8 | 2174126 | 994888 |
| 9 | 1645320 | 740663 |
| 10 | 1874401 | 869202 |
| 11 | 1885432 | 851466 |
| 12 | 1818431 | 826132 |
| 13 | 1367340 | 640670 |
| 14 | 1251729 | 562490 |
| 15 | 1125278 | 491576 |
| 16 | 1204601 | 496824 |
| 17 | 1039661 | 411860 |
| 18 | 1083944 | 490988 |
| 19 | 810927 | 311239 |
| 20 | 851007 | 369387 |
| 21 | 515507 | 225258 |
| 22 | 491574 | 200770 |
| Totals | 38040186 | 16976170 |
“Imputation output” lists number of SNPs as result of imputation and “Filter at info score 0.7” lists number of SNPs passing info score threshold.