Table 4.
Expression level of genes implicated in the lysine biosynthetic pathway in the shoot at three stages of development and in mature seeds
| Enzyme | EC # AT ID |
RPKM |
|||
|---|---|---|---|---|---|
| Shoot 15 days |
Shoot 25 days |
Shoot 30 days |
Mature seeds | ||
| AK | 2.7.2.4 AT5G13280 |
12.21 | 11.13 | 12.82 | 4.17 |
| AK-homoserine dehydrogenase | 2.7.2.4–1.1.1.3 | 23.80 | 20.43 | 16.28 | 6.98 |
| Aspartate semialdehyde dehydrogenase | 1.2.1.11 AT1G14810 |
8.36 | 6.91 | 7.73 | 3.67 |
| Dihydrodipicolinate synthase | 4.3.3.7 AT2G45440 |
11.51 | 11.88 | 7.43 | 30.77 |
| 4.3.3.7 AT3G60880 |
5.09 | 5.00 | 5.16 | 18.57 | |
| Dihydrodipicolinate reductase | 1.17.1.8 AT3G59890 |
2.37 | 1.16 | 1.35 | 0.26 |
| 1.17.1.8 AT2G44040 |
2.77 | 2.45 | 2.29 | 0.61 | |
| 1.17.1.8 AT5G52100 |
27.58 | 19.22 | 8.36 | 0.00 | |
| Diaminopimelate aminotransferase | 2.6.1.83 AT4G33680 |
0.00 | 0.05 | 0.00 | 0.00 |
| 2.6.1.83 AT2G13810 |
7.06 | 6.36 | 6.18 | 1.64 | |
| Diaminopimelate epimerase | 5.1.1.7 AT3G53580 |
42.28 | 37.48 | 34.32 | 4.91 |
| Diaminopimelate decarboxylase | 4.1.1.20 AT3G14390 |
10.67 | 10.19 | 12.64 | 3.37 |
| 4.1.1.20 AT5G11880 |
25.53 | 20.79 | 18.06 | 3.06 | |