Table 1. Maize TAS loci.
Name | Gene ID | Number of ta-siRNAs * | Number of tasiR-ARFs | Phasing score | Number of ta-siRNA reads per locus † | Fold change (WT/lbl1) ‡ |
tas3a | GRMZM2G178686 | 26 | 2 | 63.70 | 408 | 52.9 |
tas3b | GRMZM2G020468 | 20 | 2 | 41.46 | 1894 | 28.15 |
tas3c | GRMZM2G084821 | 20 | 2 | 30.54 | 854 | 84.58 |
tas3d | GRMZM2G124744 | 24 | 1 | 42.81 | 6382 | 110.92 |
tas3e | GRMZM5G806469 | 18 | 1 | 50.08 | 3475 | 251.64 |
tas3f | GRMZM2G155490 | 28 | 1 | 11.80 | 22 | 23.2 |
tas3g | GRMZM2G082055 | 20 | 1 | 50.57 | 18325 | 40.71 |
tas3h | GRMZM2G588623 | 20 | 0 | 4.97 | 16 | 19.25 |
tas3i | GRMZM2G512113 | 18 | 1 | 45.31 | 8013 | 28.59 |
*Number of predicted ta-siRNAs between miR390 binding sites from both strands.
Total number of reads in WT samples.
Adjusted p-value<0.05.