. 2014 Dec 11;9(12):e106033. doi: 10.1371/journal.pone.0106033

Table 2. Putative CArG boxes at the PeMADS promoter regions predicted by homemade software and the PLACE database.

PeMADS promoter (bp)	CArG-box sequences	Location (nt at the promoter regions)
PeMADS2	CCCTAAATGG	−214^a
(3,249)	CCATTCTAGG	−248^a
	CTTTAAATGG	−318^a
	CTATATTAAG	−750^b
	CATAATTTTG	−1,254^b
	CCAAAATTTG	−1,548^a
	CTAATTTTAG	−1,891^b
	CAAAATTTAG	−2,236^b
	CATATTAAAG	−2,586^b
PeMADS3	CAAAAAAAAG	−443^b
(1,293)	CTTTTATAAG	−1,097^b
PeMADS4	CTTATAAAAG	−65^b
(3,303)	CTATTATAGG	−434^a
	CATATTATAG	−559^b
	CATATTTTGG	−1,231^a
	CCTATGTAGG	−1,9128^a
	CATATATTAG	−2,523^b
	CTTTTTTATG	−2,656^b
	CAAAATTTTG	−2,980^b
	CAAAATTTTG	−3258^b
PeMADS5	GCTTAATTGG	−175^a
(2,062)	TCAAAATTGG	−738^a
	CATAAATATG	−862^b
	CTTTATATTG	−1,041^b
	CGATTTAAGG	−1,263^a
PeMADS6	CCAAATTTGA	−678^a
(1,514)	CAAATTTAAG	−774^b
	GCAAAATAGG	−881^a

CArG boxes predicted with a homemade software.

CArG boxes predicted with the PLACE database.